AutismKB 2.0

Annotation Detail for THSD7A


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Basic Information Top
Gene Symbol:THSD7A ( KIAA0960 )
Gene Full Name: thrombospondin, type I, domain containing 7A
Band: 7p21.3
Quick LinksEntrez ID:221981; OMIM: 612249; Uniprot ID:THS7A_HUMAN; ENSEMBL ID: ENSG00000005108; HGNC ID: 22207
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus26 / 56401246
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult55 / 193912128
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor2 / 2638457
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal95 / 336030728
ovarian tumor2 / 7668226
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow0 / 488010 
brain14 / 110098912
cervix0 / 481710 
connective tissue2 / 14925513
ear2 / 16212123
embryonic tissue5 / 21572223
esophagus0 / 202090 
eye5 / 21105423
heart1 / 8962611
intestine0 / 2344720 
kidney11 / 21177751
larynx0 / 241450 
liver0 / 2077430 
lung4 / 33697411
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle3 / 10771527
nerve1 / 1576863
ovary2 / 10205119
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta31 / 280825110
prostate5 / 18934526
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach1 / 9661910
testis3 / 3304429
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213894_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.75
Adipocyte4.65
AdrenalCortex5.2
Adrenalgland4
Amygdala4.85
Appendix9.05
AtrioventricularNode4
BDCA4+_DentriticCells5.15
Bonemarrow4.75
BronchialEpithelialCells4.6
CD105+_Endothelial4.8
CD14+_Monocytes5.05
CD19+_BCells(neg._sel.)5.1
CD33+_Myeloid6.1
CD34+5.8
CD4+_Tcells5
CD56+_NKCells5.55
CD71+_EarlyErythroid4.45
CD8+_Tcells4.4
CardiacMyocytes6.4
Caudatenucleus4.25
Cerebellum3.85
CerebellumPeduncles5.45
CiliaryGanglion3.65
CingulateCortex4.9
Colorectaladenocarcinoma4.75
DorsalRootGanglion3.85
FetalThyroid4.6
Fetalbrain4.75
Fetalliver4.15
Fetallung3.9
GlobusPallidus3.5
Heart6.25
Hypothalamus5.05
Kidney3.9
Leukemia_chronicMyelogenousK-5624.25
Leukemia_promyelocytic-HL-604.15
Leukemialymphoblastic(MOLT-4)3.7
Liver6.35
Lung5.15
Lymphnode4
Lymphoma_burkitts(Daudi)6.1
Lymphoma_burkitts(Raji)6.6
MedullaOblongata4.35
OccipitalLobe4.25
OlfactoryBulb15.75
Ovary3.25
Pancreas3.8
PancreaticIslet5.05
ParietalLobe5.05
Pituitary5.5
Placenta130.8
Pons4.55
PrefrontalCortex5.95
Prostate5.5
Salivarygland3.9
SkeletalMuscle5.7
Skin3.95
SmoothMuscle5.35
Spinalcord5.05
SubthalamicNucleus4.4
SuperiorCervicalGanglion5.75
TemporalLobe4.3
Testis4
TestisGermCell3.95
TestisIntersitial3.95
TestisLeydigCell4.75
TestisSeminiferousTubule4.05
Thalamus4.8
Thymus3.65
Thyroid5.8
Tongue4.7
Tonsil4.6
Trachea3.95
TrigeminalGanglion5.05
Uterus3.95
UterusCorpus4.45
WholeBlood5.1
Wholebrain4
colon4.75
pineal_day5.92
pineal_night5.8
retina5.7
small_intestine4.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P34138
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.57 ± 0.91
Basal Forebrain2.13 ± 0.56
Basal Part of Pons2.25 ± 0.61
Cerebellar Cortex2.34 ± 0.81
Cerebellar Nuclei2.37 ± 0.73
Claustrum2.7 ± 0.95
Epithalamus2.56 ± 0.93
Frontal Lobe2.13 ± 0.79
Globus Pallidus2.91 ± 0.79
Hypothalamus2.1 ± 0.39
Insula2.4 ± 0.84
Limbic Lobe2.7 ± 0.88
Mesencephalon2.39 ± 0.79
Myelencephalon2.37 ± 0.82
Occipital Lobe2.42 ± 0.77
Parietal Lobe2.38 ± 0.98
Pontine Tegmentum2.35 ± 0.83
Striatum2.47 ± 0.93
Subthalamus2.15 ± 0.69
Temporal Lobe2.27 ± 0.79
Thalamus2.12 ± 0.7
White Matter2.74 ± 0.45
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Gm837CBCerebellum20.23
71.37
Gm837CTXCerebral cortex22.64
23.48
Gm837HIPHippocampal region23.01
33.48
Gm837HPFHippocampal formation19.13
24.64
Gm837HYHypothalamus3.39
4.42
Gm837LSXLateral septal complex5.5
5.59
Gm837MBMidbrain13.63
14.88
Gm837MYMedulla15.21
21.87
Gm837OLFOlfactory bulb31.84
43.24
Gm837PPons7.61
10.4
Gm837PALPallidum6.54
7.08
Gm837RHPRetrohippocampal region12.51
12.26
Gm837sAMYStriatum-like amygdalar nuclei11.63
10.13
Gm837STRStriatum62.87
56.89
Gm837STRdStriatum dorsal region87.52
81.19
Gm837STRvStriatum ventral region34.39
27.98
Gm837THThalamus36.17
41.36
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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