AutismKB 2.0

Annotation Detail for GOLGA8A


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Basic Information Top
Gene Symbol:GOLGA8A ( GM88 )
Gene Full Name: golgin A8 family, member A
Band: 15q14
Quick LinksEntrez ID:23015; OMIM: NA; Uniprot ID:GOG8A_HUMAN; ENSEMBL ID: ENSG00000175265; HGNC ID: 31972
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body15 / 70761211
blastocyst16 / 62319256
fetus40 / 56401270
neonate0 / 310970 
infant3 / 23620127
juvenile2 / 5555635
adult197 / 1939121101
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma4 / 17475228
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma4 / 8282348
colorectal tumor8 / 11424670
esophageal tumor0 / 172900 
gastrointestinal tumor6 / 11936950
germ cell tumor4 / 26384515
glioma1 / 1068839
head and neck tumor28 / 136302205
kidney tumor4 / 6895958
leukemia10 / 95842104
liver tumor3 / 9635931
lung tumor7 / 10312767
lymphoma5 / 7175569
non-neoplasia10 / 97250102
normal339 / 3360307100
ovarian tumor3 / 7668239
pancreatic tumor11 / 104616105
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer5 / 10268048
retinoblastoma1 / 4635621
skin tumor3 / 12494924
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor22 / 90257243
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland2 / 3319760
ascites0 / 400150 
bladder2 / 2975767
blood6 / 12347848
bone3 / 7165541
bone marrow1 / 4880120
brain95 / 110098986
cervix2 / 4817141
connective tissue4 / 14925526
ear1 / 1621261
embryonic tissue47 / 215722217
esophagus0 / 202090 
eye11 / 21105452
heart7 / 8962678
intestine14 / 23447259
kidney8 / 21177737
larynx6 / 24145248
liver33 / 207743158
lung46 / 336974136
lymph0 / 442700 
lymph node14 / 91610152
mammary gland7 / 15327145
mouth2 / 6705229
muscle16 / 107715148
nerve3 / 15768190
ovary5 / 10205148
pancreas35 / 214812162
parathyroid1 / 2053948
pharynx1 / 4132824
pituitary gland2 / 16585120
placenta5 / 28082517
prostate12 / 18934563
salivary gland1 / 2015549
skin8 / 21057437
spleen2 / 5395237
stomach10 / 96619103
testis51 / 330442154
thymus6 / 8113173
thyroid23 / 47473484
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus33 / 232878141
vascular5 / 5178096
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208798_x_at
Cell line Expression level Expression bar
721_B_lymphoblasts570.25
Adipocyte12.9
AdrenalCortex49.65
Adrenalgland5.5
Amygdala254.7
Appendix72.1
AtrioventricularNode9.65
BDCA4+_DentriticCells179.8
Bonemarrow4.65
BronchialEpithelialCells15.45
CD105+_Endothelial29.55
CD14+_Monocytes4.55
CD19+_BCells(neg._sel.)121.9
CD33+_Myeloid10.25
CD34+329.05
CD4+_Tcells1109.2
CD56+_NKCells216.1
CD71+_EarlyErythroid4.8
CD8+_Tcells1308.35
CardiacMyocytes35.4
Caudatenucleus85.35
Cerebellum104.6
CerebellumPeduncles209.8
CiliaryGanglion19.85
CingulateCortex154.4
Colorectaladenocarcinoma85.7
DorsalRootGanglion31.5
FetalThyroid595.1
Fetalbrain350.95
Fetalliver13.4
Fetallung235.95
GlobusPallidus66.1
Heart5.3
Hypothalamus288.7
Kidney4.25
Leukemia_chronicMyelogenousK-562284.9
Leukemia_promyelocytic-HL-6025.2
Leukemialymphoblastic(MOLT-4)83.85
Liver6.9
Lung5.25
Lymphnode375.5
Lymphoma_burkitts(Daudi)4.8
Lymphoma_burkitts(Raji)42.85
MedullaOblongata93.9
OccipitalLobe103.5
OlfactoryBulb61.1
Ovary115.85
Pancreas85.9
PancreaticIslet138.8
ParietalLobe73.9
Pituitary111.05
Placenta5.05
Pons59.15
PrefrontalCortex346.7
Prostate26.1
Salivarygland247.25
SkeletalMuscle10
Skin60.7
SmoothMuscle18.85
Spinalcord144.85
SubthalamicNucleus81.75
SuperiorCervicalGanglion34.65
TemporalLobe45.05
Testis57.3
TestisGermCell318.9
TestisIntersitial181.55
TestisLeydigCell233.6
TestisSeminiferousTubule254.3
Thalamus90.3
Thymus12.1
Thyroid526.85
Tongue71.75
Tonsil160.15
Trachea29.45
TrigeminalGanglion29.9
Uterus314.65
UterusCorpus65.05
WholeBlood20.1
Wholebrain41.75
colon26.5
pineal_day199.08
pineal_night220.64
retina73.75
small_intestine30.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P37623
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.22 ± 0.28
Basal Forebrain8.19 ± 0.27
Basal Part of Pons7.81 ± 0.42
Cerebellar Cortex8.45 ± 0.25
Cerebellar Nuclei7.83 ± 0.32
Claustrum7.82 ± 0.66
Epithalamus7.55 ± 0.43
Frontal Lobe7.84 ± 0.36
Globus Pallidus7.4 ± 0.28
Hypothalamus8.03 ± 0.23
Insula7.91 ± 0.35
Limbic Lobe8.15 ± 0.43
Mesencephalon8.07 ± 0.42
Myelencephalon7.95 ± 0.4
Occipital Lobe8.59 ± 0.39
Parietal Lobe8.07 ± 0.38
Pontine Tegmentum7.99 ± 0.41
Striatum7.99 ± 0.37
Subthalamus7.89 ± 0.18
Temporal Lobe7.94 ± 0.4
Thalamus7.95 ± 0.25
White Matter7.68 ± 0.17
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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