AutismKB 2.0

Annotation Detail for CLUAP1


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Basic Information Top
Gene Symbol:CLUAP1 ( FAP22,FLJ13297,KIAA0643 )
Gene Full Name: clusterin associated protein 1
Band: 16p13.3
Quick LinksEntrez ID:23059; OMIM: NA; Uniprot ID:CLUA1_HUMAN; ENSEMBL ID: ENSG00000103351; HGNC ID: 19009
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst0 / 623190 
fetus21 / 56401237
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult78 / 193912140
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor2 / 3436658
chondrosarcoma2 / 8282324
colorectal tumor1 / 1142468
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor13 / 26384549
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal128 / 336030738
ovarian tumor7 / 7668291
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma3 / 4635664
skin tumor2 / 12494916
soft tissue/muscle tissue tumor2 / 12519115
uterine tumor3 / 9025733
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland1 / 3319730
ascites3 / 4001574
bladder0 / 297570 
blood0 / 1234780 
bone2 / 7165527
bone marrow2 / 4880140
brain41 / 110098937
cervix2 / 4817141
connective tissue2 / 14925513
ear1 / 1621261
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye16 / 21105475
heart0 / 896260 
intestine3 / 23447212
kidney5 / 21177723
larynx0 / 241450 
liver1 / 2077434
lung14 / 33697441
lymph0 / 442700 
lymph node2 / 9161021
mammary gland9 / 15327158
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary8 / 10205178
pancreas3 / 21481213
parathyroid2 / 2053997
pharynx4 / 4132896
pituitary gland0 / 165850 
placenta10 / 28082535
prostate0 / 1893450 
salivary gland0 / 201550 
skin7 / 21057433
spleen0 / 539520 
stomach2 / 9661920
testis23 / 33044269
thymus1 / 8113112
thyroid3 / 4747363
tonsil0 / 169990 
trachea4 / 5241376
umbilical cord0 / 136800 
uterus8 / 23287834
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 204576_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.2
Adipocyte5.05
AdrenalCortex5.2
Adrenalgland4.2
Amygdala5.6
Appendix6.2
AtrioventricularNode4.55
BDCA4+_DentriticCells5.55
Bonemarrow4.9
BronchialEpithelialCells4.85
CD105+_Endothelial5.35
CD14+_Monocytes5.15
CD19+_BCells(neg._sel.)4.85
CD33+_Myeloid6.3
CD34+8.25
CD4+_Tcells13.6
CD56+_NKCells6
CD71+_EarlyErythroid4.7
CD8+_Tcells10.45
CardiacMyocytes6.05
Caudatenucleus5.55
Cerebellum4.05
CerebellumPeduncles5.65
CiliaryGanglion3.55
CingulateCortex5.95
Colorectaladenocarcinoma5.05
DorsalRootGanglion3.85
FetalThyroid4.9
Fetalbrain5.2
Fetalliver4.3
Fetallung4.25
GlobusPallidus4.05
Heart6.3
Hypothalamus7.3
Kidney4.05
Leukemia_chronicMyelogenousK-5624.55
Leukemia_promyelocytic-HL-604.45
Leukemialymphoblastic(MOLT-4)4.05
Liver6.55
Lung5.4
Lymphnode4.35
Lymphoma_burkitts(Daudi)6.35
Lymphoma_burkitts(Raji)6.9
MedullaOblongata5.3
OccipitalLobe4.9
OlfactoryBulb4
Ovary3.3
Pancreas4
PancreaticIslet5.35
ParietalLobe5.55
Pituitary7.8
Placenta4.9
Pons6.35
PrefrontalCortex7.2
Prostate5.95
Salivarygland4.6
SkeletalMuscle5.75
Skin3.9
SmoothMuscle5.7
Spinalcord5.95
SubthalamicNucleus5.6
SuperiorCervicalGanglion9.05
TemporalLobe5.5
Testis8.6
TestisGermCell7.7
TestisIntersitial10.65
TestisLeydigCell9
TestisSeminiferousTubule15.85
Thalamus6.1
Thymus3.9
Thyroid6.5
Tongue4.95
Tonsil4.9
Trachea4.8
TrigeminalGanglion4.95
Uterus4.15
UterusCorpus4.9
WholeBlood5.25
Wholebrain4.3
colon4.95
pineal_day31.2
pineal_night22.82
retina6.375
small_intestine4.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_978_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.26 ± 0.64
Basal Forebrain5.33 ± 0.28
Basal Part of Pons5.55 ± 0.26
Cerebellar Cortex5.27 ± 0.34
Cerebellar Nuclei5.11 ± 0.37
Claustrum5.13 ± 0.75
Epithalamus6.24 ± 0.35
Frontal Lobe5.27 ± 0.44
Globus Pallidus5.73 ± 0.21
Hypothalamus5.1 ± 0.44
Insula5.31 ± 0.27
Limbic Lobe5.18 ± 0.43
Mesencephalon5.26 ± 0.45
Myelencephalon5.3 ± 0.48
Occipital Lobe5.29 ± 0.51
Parietal Lobe5.32 ± 0.41
Pontine Tegmentum5.29 ± 0.52
Striatum5.63 ± 0.31
Subthalamus4.98 ± 0.43
Temporal Lobe5.34 ± 0.35
Thalamus5.39 ± 0.36
White Matter5.37 ± 0.65
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Cluap1CBCerebellum25.26
34.96
Cluap1CTXCerebral cortex100
92.76
Cluap1HIPHippocampal region66.92
99.87
Cluap1HPFHippocampal formation90.34
100
Cluap1HYHypothalamus49.12
35.43
Cluap1LSXLateral septal complex61.64
46.1
Cluap1MBMidbrain39.76
35.85
Cluap1MYMedulla18.06
21.6
Cluap1OLFOlfactory bulb88.59
81.4
Cluap1PPons29.36
29.52
Cluap1PALPallidum29.78
24.47
Cluap1RHPRetrohippocampal region100
100
Cluap1sAMYStriatum-like amygdalar nuclei97.29
69.35
Cluap1STRStriatum68.15
48.35
Cluap1STRdStriatum dorsal region68.46
48.09
Cluap1STRvStriatum ventral region58.91
42.06
Cluap1THThalamus43.85
34.38
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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