Annotation Detail for ZNF609
Basic Information Top
| Gene Symbol: | ZNF609 ( KIAA0295,MGC164858 ) |
|---|---|
| Gene Full Name: | zinc finger protein 609 |
| Band: | 15q22.1 |
| Quick Links | Entrez ID:23060; OMIM: NA; Uniprot ID:ZN609_HUMAN; ENSEMBL ID: ENSG00000180357; HGNC ID: 29003 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.727636
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 1 / 564012 | 1 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 4 / 1939121 | 2 |  |
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 1 / 564012 | 1 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 4 / 1939121 | 2 | |
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 4 / 62319 | 64 | |
| fetus | 19 / 564012 | 33 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 2 / 55556 | 35 | |
| adult | 75 / 1939121 | 38 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 5 / 3360307 | 1 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 1 / 90257 | 11 | |
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 1 / 119369 | 8 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 4 / 3360307 | 1 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 | |
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 5 / 17475 | 286 |  |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 4 / 119369 | 33 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 11 / 136302 | 80 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 89 / 3360307 | 26 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 9 / 46356 | 194 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 6 / 1100989 | 5 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 2 / 336974 | 5 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 | |
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 0 / 1100989 | 0 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 0 / 336974 | 0 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 | |
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 1 / 29757 | 33 | |
| blood | 2 / 123478 | 16 | |
| bone | 6 / 71655 | 83 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 16 / 1100989 | 14 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 9 / 215722 | 41 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 20 / 211054 | 94 | |
| heart | 0 / 89626 | 0 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 10 / 24145 | 414 | |
| liver | 1 / 207743 | 4 | |
| lung | 8 / 336974 | 23 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 7 / 153271 | 45 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 5 / 214812 | 23 | |
| parathyroid | 3 / 20539 | 146 | |
| pharynx | 3 / 41328 | 72 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 3 / 280825 | 10 | |
| prostate | 7 / 189345 | 36 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 9 / 210574 | 42 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 8 / 330442 | 24 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 212618_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 9.4 | |
| Adipocyte | 8.15 | |
| AdrenalCortex | 8.95 | |
| Adrenalgland | 7.15 | |
| Amygdala | 8.6 | |
| Appendix | 8.25 | |
| AtrioventricularNode | 7.15 | |
| BDCA4+_DentriticCells | 8.95 | |
| Bonemarrow | 8.8 | |
| BronchialEpithelialCells | 7.05 | |
| CD105+_Endothelial | 7.5 | |
| CD14+_Monocytes | 8.3 | |
| CD19+_BCells(neg._sel.) | 8.65 | |
| CD33+_Myeloid | 10.15 | |
| CD34+ | 10.6 | |
| CD4+_Tcells | 8.8 | |
| CD56+_NKCells | 9.7 | |
| CD71+_EarlyErythroid | 7.6 | |
| CD8+_Tcells | 8.05 | |
| CardiacMyocytes | 10.9 | |
| Caudatenucleus | 7.4 | |
| Cerebellum | 6.65 | |
| CerebellumPeduncles | 9.3 | |
| CiliaryGanglion | 5.9 | |
| CingulateCortex | 9.4 | |
| Colorectaladenocarcinoma | 8.15 | |
| DorsalRootGanglion | 6.4 | |
| FetalThyroid | 8.05 | |
| Fetalbrain | 8.2 | |
| Fetalliver | 7.1 | |
| Fetallung | 6.2 | |
| GlobusPallidus | 6 | |
| Heart | 10.6 | |
| Hypothalamus | 8.9 | |
| Kidney | 6.85 | |
| Leukemia_chronicMyelogenousK-562 | 7.45 | |
| Leukemia_promyelocytic-HL-60 | 7.25 | |
| Leukemialymphoblastic(MOLT-4) | 6.6 | |
| Liver | 10.85 | |
| Lung | 9.3 | |
| Lymphnode | 7.2 | |
| Lymphoma_burkitts(Daudi) | 11 | |
| Lymphoma_burkitts(Raji) | 11.55 | |
| MedullaOblongata | 7.65 | |
| OccipitalLobe | 7.45 | |
| OlfactoryBulb | 6.5 | |
| Ovary | 5.95 | |
| Pancreas | 6.65 | |
| PancreaticIslet | 8.75 | |
| ParietalLobe | 8.95 | |
| Pituitary | 9.65 | |
| Placenta | 7.7 | |
| Pons | 10.55 | |
| PrefrontalCortex | 10.05 | |
| Prostate | 9.5 | |
| Salivarygland | 9.35 | |
| SkeletalMuscle | 9.55 | |
| Skin | 6.8 | |
| SmoothMuscle | 9.35 | |
| Spinalcord | 8.75 | |
| SubthalamicNucleus | 7.45 | |
| SuperiorCervicalGanglion | 9.3 | |
| TemporalLobe | 7.5 | |
| Testis | 7.2 | |
| TestisGermCell | 7.1 | |
| TestisIntersitial | 6.9 | |
| TestisLeydigCell | 8.6 | |
| TestisSeminiferousTubule | 8.7 | |
| Thalamus | 8.6 | |
| Thymus | 6.5 | |
| Thyroid | 10.3 | |
| Tongue | 8.25 | |
| Tonsil | 8.8 | |
| Trachea | 7.65 | |
| TrigeminalGanglion | 10.75 | |
| Uterus | 6.7 | |
| UterusCorpus | 7.2 | |
| WholeBlood | 8.4 | |
| Wholebrain | 6.9 | |
| colon | 8.3 | |
| pineal_day | 10.32 | |
| pineal_night | 10.06 | |
| retina | 10.1 | |
| small_intestine | 8.3 | |
- Probe name: A_32_P176609
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 10.84 ± 0.17 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 10.9 ± 0.13 | |
| Basal Part of Pons | 10.61 ± 0.13 | |
| Cerebellar Cortex | 10.99 ± 0.19 | |
| Cerebellar Nuclei | 10.75 ± 0.26 | |
| Claustrum | 10.73 ± 0.21 | |
| Epithalamus | 11.02 ± 0.31 | |
| Frontal Lobe | 10.84 ± 0.27 | |
| Globus Pallidus | 11.42 ± 0.16 | |
| Hypothalamus | 10.7 ± 0.24 | |
| Insula | 10.96 ± 0.19 | |
| Limbic Lobe | 10.97 ± 0.28 | |
| Mesencephalon | 10.91 ± 0.26 | |
| Myelencephalon | 10.9 ± 0.26 | |
| Occipital Lobe | 11.02 ± 0.22 | |
| Parietal Lobe | 10.97 ± 0.22 | |
| Pontine Tegmentum | 10.92 ± 0.22 | |
| Striatum | 10.99 ± 0.32 | |
| Subthalamus | 10.98 ± 0.2 | |
| Temporal Lobe | 10.89 ± 0.2 | |
| Thalamus | 10.82 ± 0.22 | |
| White Matter | 11.93 ± 0.19 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Zfp609 | CB | Cerebellum | 20.46 | |
| 21.24 | | |||
| Zfp609 | CTX | Cerebral cortex | 35.05 | |
| 24.41 | | |||
| Zfp609 | HIP | Hippocampal region | 29.73 | |
| 41.12 | | |||
| Zfp609 | HPF | Hippocampal formation | 33.85 | |
| 37.41 | | |||
| Zfp609 | HY | Hypothalamus | 10.4 | |
| 7.52 | | |||
| Zfp609 | LSX | Lateral septal complex | 10.83 | |
| 7.34 | | |||
| Zfp609 | MB | Midbrain | 13.38 | |
| 11.02 | | |||
| Zfp609 | MY | Medulla | 18.37 | |
| 18.57 | | |||
| Zfp609 | OLF | Olfactory bulb | 37.12 | |
| 30.07 | | |||
| Zfp609 | P | Pons | 16.13 | |
| 15.31 | | |||
| Zfp609 | PAL | Pallidum | 9.79 | |
| 8.22 | | |||
| Zfp609 | RHP | Retrohippocampal region | 44.19 | |
| 33.88 | | |||
| Zfp609 | sAMY | Striatum-like amygdalar nuclei | 31.74 | |
| 22.27 | | |||
| Zfp609 | STR | Striatum | 15.12 | |
| 10.53 | | |||
| Zfp609 | STRd | Striatum dorsal region | 14.46 | |
| 10.18 | | |||
| Zfp609 | STRv | Striatum ventral region | 10.08 | |
| 6.92 | | |||
| Zfp609 | TH | Thalamus | 24.1 | |
| 20.41 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00077362 | 17 | 125 | 141 | SGDGANAGGLVAAIAPK | Peptide Atlas |