Annotation Detail for MYCBP2


Gene Symbol: | MYCBP2 ( DKFZp686M08244,FLJ10106,FLJ13826,FLJ21597,FLJ21646,KIAA0916,PAM ) |
---|---|
Gene Full Name: | MYC binding protein 2 |
Band: | 13q22.3 |
Quick Links | Entrez ID:23077; OMIM: 610392; Uniprot ID:MYCB2_HUMAN; ENSEMBL ID: ENSG00000005810; HGNC ID: 23386 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591221
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
embryoid body | 8 / 70761 | 113 | ![]() |
blastocyst | 5 / 62319 | 80 | ![]() |
fetus | 75 / 564012 | 132 | ![]() |
neonate | 0 / 31097 | 0 | |
infant | 2 / 23620 | 84 | ![]() |
juvenile | 4 / 55556 | 71 | ![]() |
adult | 142 / 1939121 | 73 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adrenal tumor | 1 / 12794 | 78 | ![]() |
bladder carcinoma | 1 / 17475 | 57 | ![]() |
breast (mammary gland) tumor | 5 / 94178 | 53 | ![]() |
cervical tumor | 0 / 34366 | 0 | |
chondrosarcoma | 7 / 82823 | 84 | ![]() |
colorectal tumor | 4 / 114246 | 35 | ![]() |
esophageal tumor | 4 / 17290 | 231 | ![]() |
gastrointestinal tumor | 9 / 119369 | 75 | ![]() |
germ cell tumor | 8 / 263845 | 30 | ![]() |
glioma | 17 / 106883 | 159 | ![]() |
head and neck tumor | 17 / 136302 | 124 | ![]() |
kidney tumor | 3 / 68959 | 43 | ![]() |
leukemia | 7 / 95842 | 73 | ![]() |
liver tumor | 1 / 96359 | 10 | ![]() |
lung tumor | 4 / 103127 | 38 | ![]() |
lymphoma | 4 / 71755 | 55 | ![]() |
non-neoplasia | 9 / 97250 | 92 | ![]() |
normal | 292 / 3360307 | 86 | ![]() |
ovarian tumor | 2 / 76682 | 26 | ![]() |
pancreatic tumor | 2 / 104616 | 19 | ![]() |
primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | ![]() |
prostate cancer | 5 / 102680 | 48 | ![]() |
retinoblastoma | 0 / 46356 | 0 | |
skin tumor | 1 / 124949 | 8 | ![]() |
soft tissue/muscle tissue tumor | 3 / 125191 | 23 | ![]() |
uterine tumor | 6 / 90257 | 66 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adipose tissue | 2 / 13106 | 152 | ![]() |
adrenal gland | 1 / 33197 | 30 | ![]() |
ascites | 3 / 40015 | 74 | ![]() |
bladder | 0 / 29757 | 0 | |
blood | 6 / 123478 | 48 | ![]() |
bone | 5 / 71655 | 69 | ![]() |
bone marrow | 3 / 48801 | 61 | ![]() |
brain | 145 / 1100989 | 131 | ![]() |
cervix | 0 / 48171 | 0 | |
connective tissue | 9 / 149255 | 60 | ![]() |
ear | 1 / 16212 | 61 | ![]() |
embryonic tissue | 16 / 215722 | 74 | ![]() |
esophagus | 4 / 20209 | 197 | ![]() |
eye | 13 / 211054 | 61 | ![]() |
heart | 8 / 89626 | 89 | ![]() |
intestine | 8 / 234472 | 34 | ![]() |
kidney | 13 / 211777 | 61 | ![]() |
larynx | 4 / 24145 | 165 | ![]() |
liver | 3 / 207743 | 14 | ![]() |
lung | 11 / 336974 | 32 | ![]() |
lymph | 4 / 44270 | 90 | ![]() |
lymph node | 18 / 91610 | 196 | ![]() |
mammary gland | 13 / 153271 | 84 | ![]() |
mouth | 10 / 67052 | 149 | ![]() |
muscle | 13 / 107715 | 120 | ![]() |
nerve | 2 / 15768 | 126 | ![]() |
ovary | 2 / 102051 | 19 | ![]() |
pancreas | 4 / 214812 | 18 | ![]() |
parathyroid | 2 / 20539 | 97 | ![]() |
pharynx | 1 / 41328 | 24 | ![]() |
pituitary gland | 1 / 16585 | 60 | ![]() |
placenta | 7 / 280825 | 24 | ![]() |
prostate | 7 / 189345 | 36 | ![]() |
salivary gland | 1 / 20155 | 49 | ![]() |
skin | 3 / 210574 | 14 | ![]() |
spleen | 5 / 53952 | 92 | ![]() |
stomach | 11 / 96619 | 113 | ![]() |
testis | 12 / 330442 | 36 | ![]() |
thymus | 6 / 81131 | 73 | ![]() |
thyroid | 8 / 47473 | 168 | ![]() |
tonsil | 7 / 16999 | 411 | ![]() |
trachea | 6 / 52413 | 114 | ![]() |
umbilical cord | 0 / 13680 | 0 | |
uterus | 13 / 232878 | 55 | ![]() |
vascular | 3 / 51780 | 57 | ![]() |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 201960_s_at
Cell line | Expression level | Expression bar |
---|---|---|
![]() | ||
721_B_lymphoblasts | 683.75 | ![]() |
Adipocyte | 366.55 | ![]() |
AdrenalCortex | 28.1 | ![]() |
Adrenalgland | 8.15 | ![]() |
Amygdala | 887.75 | ![]() |
Appendix | 26.5 | ![]() |
AtrioventricularNode | 13.05 | ![]() |
BDCA4+_DentriticCells | 658 | ![]() |
Bonemarrow | 13.6 | ![]() |
BronchialEpithelialCells | 45.8 | ![]() |
CD105+_Endothelial | 255.5 | ![]() |
CD14+_Monocytes | 550.5 | ![]() |
CD19+_BCells(neg._sel.) | 1310.1 | ![]() |
CD33+_Myeloid | 853.8 | ![]() |
CD34+ | 1173.2 | ![]() |
CD4+_Tcells | 798.8 | ![]() |
CD56+_NKCells | 938.55 | ![]() |
CD71+_EarlyErythroid | 11.45 | ![]() |
CD8+_Tcells | 832.5 | ![]() |
CardiacMyocytes | 15.75 | ![]() |
Caudatenucleus | 129.95 | ![]() |
Cerebellum | 25.65 | ![]() |
CerebellumPeduncles | 103.3 | ![]() |
CiliaryGanglion | 15.25 | ![]() |
CingulateCortex | 452.4 | ![]() |
Colorectaladenocarcinoma | 52.8 | ![]() |
DorsalRootGanglion | 33.3 | ![]() |
FetalThyroid | 83.35 | ![]() |
Fetalbrain | 458.45 | ![]() |
Fetalliver | 9.55 | ![]() |
Fetallung | 32.1 | ![]() |
GlobusPallidus | 203.05 | ![]() |
Heart | 18.2 | ![]() |
Hypothalamus | 434 | ![]() |
Kidney | 8.55 | ![]() |
Leukemia_chronicMyelogenousK-562 | 15 | ![]() |
Leukemia_promyelocytic-HL-60 | 217 | ![]() |
Leukemialymphoblastic(MOLT-4) | 153.4 | ![]() |
Liver | 13.05 | ![]() |
Lung | 18.45 | ![]() |
Lymphnode | 305.8 | ![]() |
Lymphoma_burkitts(Daudi) | 234.05 | ![]() |
Lymphoma_burkitts(Raji) | 53.15 | ![]() |
MedullaOblongata | 290.45 | ![]() |
OccipitalLobe | 309.05 | ![]() |
OlfactoryBulb | 59.65 | ![]() |
Ovary | 10.55 | ![]() |
Pancreas | 110.1 | ![]() |
PancreaticIslet | 56.8 | ![]() |
ParietalLobe | 332.3 | ![]() |
Pituitary | 86.1 | ![]() |
Placenta | 11.25 | ![]() |
Pons | 107.6 | ![]() |
PrefrontalCortex | 1212 | ![]() |
Prostate | 233.4 | ![]() |
Salivarygland | 42.5 | ![]() |
SkeletalMuscle | 16.45 | ![]() |
Skin | 27.4 | ![]() |
SmoothMuscle | 27.75 | ![]() |
Spinalcord | 126.6 | ![]() |
SubthalamicNucleus | 281.15 | ![]() |
SuperiorCervicalGanglion | 26.75 | ![]() |
TemporalLobe | 240 | ![]() |
Testis | 30.35 | ![]() |
TestisGermCell | 127.1 | ![]() |
TestisIntersitial | 39.35 | ![]() |
TestisLeydigCell | 36.25 | ![]() |
TestisSeminiferousTubule | 64.8 | ![]() |
Thalamus | 240.3 | ![]() |
Thymus | 128.35 | ![]() |
Thyroid | 172.1 | ![]() |
Tongue | 113.1 | ![]() |
Tonsil | 268.65 | ![]() |
Trachea | 21.6 | ![]() |
TrigeminalGanglion | 15.35 | ![]() |
Uterus | 174.9 | ![]() |
UterusCorpus | 12.25 | ![]() |
WholeBlood | 186.1 | ![]() |
Wholebrain | 181.9 | ![]() |
colon | 47.4 | ![]() |
pineal_day | 377.18 | ![]() |
pineal_night | 408.06 | ![]() |
retina | 47.125 | ![]() |
small_intestine | 30.5 | ![]() |
- Probe name: A_24_P323815
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 10.6 ± 0.22 | ![]() ![]() ![]() |
Basal Forebrain | 9.89 ± 0.13 | ![]() ![]() ![]() |
Basal Part of Pons | 10.54 ± 0.23 | ![]() ![]() ![]() |
Cerebellar Cortex | 10.16 ± 0.14 | ![]() ![]() ![]() |
Cerebellar Nuclei | 9.92 ± 0.42 | ![]() ![]() ![]() |
Claustrum | 10.38 ± 0.25 | ![]() ![]() ![]() |
Epithalamus | 10.07 ± 0.3 | ![]() ![]() ![]() |
Frontal Lobe | 10.25 ± 0.28 | ![]() ![]() ![]() |
Globus Pallidus | 9.32 ± 0.3 | ![]() ![]() ![]() |
Hypothalamus | 9.92 ± 0.3 | ![]() ![]() ![]() |
Insula | 10.39 ± 0.1 | ![]() ![]() ![]() |
Limbic Lobe | 10.4 ± 0.32 | ![]() ![]() ![]() |
Mesencephalon | 10.09 ± 0.35 | ![]() ![]() ![]() |
Myelencephalon | 10.17 ± 0.37 | ![]() ![]() ![]() |
Occipital Lobe | 10.35 ± 0.22 | ![]() ![]() ![]() |
Parietal Lobe | 10.3 ± 0.26 | ![]() ![]() ![]() |
Pontine Tegmentum | 10.15 ± 0.22 | ![]() ![]() ![]() |
Striatum | 9.97 ± 0.38 | ![]() ![]() ![]() |
Subthalamus | 10.32 ± 0.32 | ![]() ![]() ![]() |
Temporal Lobe | 10.36 ± 0.22 | ![]() ![]() ![]() |
Thalamus | 10.1 ± 0.2 | ![]() ![]() ![]() |
White Matter | 9.11 ± 0.28 | ![]() ![]() ![]() |
Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
---|---|---|---|---|
Phr1 | CB | Cerebellum | 58.37 | ![]() |
69.45 | ![]() | |||
Phr1 | CTX | Cerebral cortex | 100 | ![]() |
100 | ![]() | |||
Phr1 | HPF | Hippocampal formation | 100 | ![]() |
100 | ![]() | |||
Phr1 | LSX | Lateral septal complex | 100 | ![]() |
100 | ![]() | |||
Phr1 | MB | Midbrain | 100 | ![]() |
100 | ![]() | |||
Phr1 | MY | Medulla | 100 | ![]() |
100 | ![]() | |||
Phr1 | PAL | Pallidum | 100 | ![]() |
100 | ![]() | |||
Phr1 | RHP | Retrohippocampal region | 100 | ![]() |
100 | ![]() | |||
Phr1 | sAMY | Striatum-like amygdalar nuclei | 100 | ![]() |
100 | ![]() | |||
Phr1 | STRd | Striatum dorsal region | 100 | ![]() |
87.78 | ![]() | |||
Phr1 | TH | Thalamus | 100 | ![]() |
100 | ![]() |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00027742 | 21 | 1151 | 1171 | SHAALHILGCLDTLAAMQDLK | Peptide Atlas |