AutismKB 2.0

Annotation Detail for PEG10


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Basic Information Top
Gene Symbol:PEG10 ( EDR,HB-1,KIAA1051,MEF3L,Mar2,Mart2,RGAG3 )
Gene Full Name: paternally expressed 10
Band: 7q21.3
Quick LinksEntrez ID:23089; OMIM: 609810; Uniprot ID:PEG10_HUMAN; ENSEMBL ID: ENSG00000242265; HGNC ID: 14005
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body20 / 70761282
blastocyst11 / 62319176
fetus148 / 564012262
neonate4 / 31097128
infant0 / 236200 
juvenile14 / 55556251
adult250 / 1939121128
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor3 / 12794234
bladder carcinoma1 / 1747557
breast (mammary gland) tumor17 / 94178180
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor25 / 26384594
glioma9 / 10688384
head and neck tumor12 / 13630288
kidney tumor10 / 68959145
leukemia0 / 958420 
liver tumor40 / 96359415
lung tumor2 / 10312719
lymphoma4 / 7175555
non-neoplasia2 / 9725020
normal499 / 3360307148
ovarian tumor3 / 7668239
pancreatic tumor6 / 10461657
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma4 / 4635686
skin tumor7 / 12494956
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland10 / 33197301
ascites1 / 4001524
bladder1 / 2975733
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain122 / 1100989110
cervix0 / 481710 
connective tissue2 / 14925513
ear6 / 16212370
embryonic tissue57 / 215722264
esophagus0 / 202090 
eye11 / 21105452
heart38 / 89626423
intestine3 / 23447212
kidney15 / 21177770
larynx0 / 241450 
liver43 / 207743206
lung32 / 33697494
lymph1 / 4427022
lymph node4 / 9161043
mammary gland22 / 153271143
mouth10 / 67052149
muscle7 / 10771564
nerve4 / 15768253
ovary3 / 10205129
pancreas14 / 21481265
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland15 / 16585904
placenta129 / 280825459
prostate1 / 1893455
salivary gland0 / 201550 
skin20 / 21057494
spleen0 / 539520 
stomach1 / 9661910
testis39 / 330442118
thymus0 / 811310 
thyroid2 / 4747342
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord2 / 13680146
uterus5 / 23287821
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212092_at
Cell line Expression level Expression bar
721_B_lymphoblasts48
Adipocyte44.25
AdrenalCortex125.1
Adrenalgland53.4
Amygdala47
Appendix5.05
AtrioventricularNode3.9
BDCA4+_DentriticCells4.95
Bonemarrow4.85
BronchialEpithelialCells4.75
CD105+_Endothelial5.05
CD14+_Monocytes4.95
CD19+_BCells(neg._sel.)5.3
CD33+_Myeloid5.9
CD34+6.05
CD4+_Tcells5
CD56+_NKCells5.4
CD71+_EarlyErythroid4.5
CD8+_Tcells4.75
CardiacMyocytes6.7
Caudatenucleus26.9
Cerebellum69.75
CerebellumPeduncles69.45
CiliaryGanglion3.55
CingulateCortex5.05
Colorectaladenocarcinoma4.95
DorsalRootGanglion3.85
FetalThyroid4.8
Fetalbrain41.05
Fetalliver472.2
Fetallung20.5
GlobusPallidus4.45
Heart6.45
Hypothalamus32.25
Kidney3.95
Leukemia_chronicMyelogenousK-5624.5
Leukemia_promyelocytic-HL-6024.5
Leukemialymphoblastic(MOLT-4)3.85
Liver6.5
Lung5.15
Lymphnode4.15
Lymphoma_burkitts(Daudi)6.3
Lymphoma_burkitts(Raji)7
MedullaOblongata4.6
OccipitalLobe15.6
OlfactoryBulb3.9
Ovary3.3
Pancreas3.85
PancreaticIslet9.35
ParietalLobe5.3
Pituitary763.25
Placenta894.15
Pons4.85
PrefrontalCortex6.3
Prostate5.75
Salivarygland4
SkeletalMuscle5.8
Skin3.8
SmoothMuscle9.5
Spinalcord5.25
SubthalamicNucleus5.8
SuperiorCervicalGanglion5.7
TemporalLobe4.5
Testis6.85
TestisGermCell93.15
TestisIntersitial9.25
TestisLeydigCell6
TestisSeminiferousTubule4.45
Thalamus5.05
Thymus3.85
Thyroid6.2
Tongue4.8
Tonsil4.7
Trachea4.2
TrigeminalGanglion5.05
Uterus4.05
UterusCorpus4.45
WholeBlood5.25
Wholebrain4.65
colon5
pineal_day11.32
pineal_night12.86
retina6
small_intestine4.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P82503
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.28 ± 0.45
Basal Forebrain8.42 ± 0.86
Basal Part of Pons7.33 ± 0.43
Cerebellar Cortex7.83 ± 0.35
Cerebellar Nuclei6.61 ± 0.53
Claustrum6.71 ± 0.47
Epithalamus7.45 ± 0.63
Frontal Lobe7.49 ± 0.62
Globus Pallidus5.75 ± 0.79
Hypothalamus8.9 ± 0.64
Insula7.67 ± 0.35
Limbic Lobe7.58 ± 0.76
Mesencephalon7.77 ± 1.02
Myelencephalon7.37 ± 0.91
Occipital Lobe6.9 ± 0.7
Parietal Lobe6.99 ± 0.57
Pontine Tegmentum7.41 ± 0.91
Striatum8.39 ± 0.91
Subthalamus7.05 ± 0.88
Temporal Lobe7.35 ± 0.64
Thalamus6.5 ± 0.63
White Matter7.2 ± 0.35
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Peg10CBCerebellum23.36
26.91
Peg10CTXCerebral cortex19.06
14.8
Peg10HIPHippocampal region22.39
26.28
Peg10HPFHippocampal formation20.46
21.53
Peg10HYHypothalamus70.37
100
Peg10LSXLateral septal complex69.45
88.8
Peg10MBMidbrain27.98
36.76
Peg10MYMedulla36.74
51.26
Peg10OLFOlfactory bulb23.31
19.47
Peg10PPons35.98
51.21
Peg10PALPallidum31.91
47.16
Peg10RHPRetrohippocampal region18.18
16.39
Peg10sAMYStriatum-like amygdalar nuclei61.51
89.43
Peg10STRStriatum30.76
35.03
Peg10STRdStriatum dorsal region11.31
9.83
Peg10STRvStriatum ventral region58.99
59.86
Peg10THThalamus10.24
11.24
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00500813 8 156 163 HVFEDPQR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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