AutismKB 2.0

Annotation Detail for POGZ


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Basic Information Top
Gene Symbol:POGZ ( KIAA0461,MGC71543,SUHW5,ZNF280E,ZNF635,ZNF635m )
Gene Full Name: pogo transposable element with ZNF domain
Band: 1q21.3
Quick LinksEntrez ID:23126; OMIM: NA; Uniprot ID:POGZ_HUMAN; ENSEMBL ID: ENSG00000143442; HGNC ID: 18801
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst6 / 6231996
fetus62 / 564012109
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult126 / 193912164
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212153_at
Cell line Expression level Expression bar
721_B_lymphoblasts189.9
Adipocyte40.95
AdrenalCortex64.8
Adrenalgland44.25
Amygdala53.8
Appendix57.65
AtrioventricularNode31.35
BDCA4+_DentriticCells75.3
Bonemarrow52
BronchialEpithelialCells17.65
CD105+_Endothelial53.5
CD14+_Monocytes56.4
CD19+_BCells(neg._sel.)88.8
CD33+_Myeloid49.75
CD34+185.95
CD4+_Tcells261
CD56+_NKCells110.8
CD71+_EarlyErythroid53.75
CD8+_Tcells202.45
CardiacMyocytes19.8
Caudatenucleus82.85
Cerebellum101.55
CerebellumPeduncles137
CiliaryGanglion32.7
CingulateCortex123.9
Colorectaladenocarcinoma19.1
DorsalRootGanglion35.7
FetalThyroid101.35
Fetalbrain245.85
Fetalliver28.55
Fetallung70.65
GlobusPallidus52.45
Heart6.5
Hypothalamus111.55
Kidney33.2
Leukemia_chronicMyelogenousK-56252.8
Leukemia_promyelocytic-HL-6060.75
Leukemialymphoblastic(MOLT-4)127.25
Liver23.35
Lung50.85
Lymphnode86.75
Lymphoma_burkitts(Daudi)102.2
Lymphoma_burkitts(Raji)69.5
MedullaOblongata80.8
OccipitalLobe89.2
OlfactoryBulb104.7
Ovary8.9
Pancreas30.2
PancreaticIslet38
ParietalLobe73.35
Pituitary168.75
Placenta55.75
Pons48.9
PrefrontalCortex265.35
Prostate48.4
Salivarygland50.1
SkeletalMuscle57.6
Skin31.75
SmoothMuscle10.75
Spinalcord125.4
SubthalamicNucleus59.35
SuperiorCervicalGanglion29.65
TemporalLobe40.3
Testis45.35
TestisGermCell76.7
TestisIntersitial43.9
TestisLeydigCell52.5
TestisSeminiferousTubule87.55
Thalamus80.6
Thymus67.45
Thyroid57
Tongue54.45
Tonsil81.3
Trachea47.05
TrigeminalGanglion18.2
Uterus49.5
UterusCorpus38.05
WholeBlood61.95
Wholebrain41.6
colon48.7
pineal_day418.08
pineal_night364.24
retina130.775
small_intestine46.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P63219
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.29 ± 0.25
Basal Forebrain10.27 ± 0.21
Basal Part of Pons9.87 ± 0.28
Cerebellar Cortex10.36 ± 0.2
Cerebellar Nuclei10.2 ± 0.23
Claustrum10.52 ± 0.37
Epithalamus10.25 ± 0.36
Frontal Lobe10.06 ± 0.28
Globus Pallidus10.62 ± 0.27
Hypothalamus10 ± 0.29
Insula10.11 ± 0.26
Limbic Lobe10.32 ± 0.4
Mesencephalon10.28 ± 0.33
Myelencephalon10.24 ± 0.33
Occipital Lobe10.61 ± 0.4
Parietal Lobe10.24 ± 0.3
Pontine Tegmentum10.23 ± 0.3
Striatum10.35 ± 0.31
Subthalamus10.14 ± 0.34
Temporal Lobe10.11 ± 0.28
Thalamus10.19 ± 0.27
White Matter11.46 ± 0.31
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
PogzCBCerebellum14.38
38.34
PogzCTXCerebral cortex24.09
23.91
PogzHIPHippocampal region6.76
10.23
PogzHPFHippocampal formation9.36
12.86
PogzHYHypothalamus17.32
20.97
PogzLSXLateral septal complex18.35
24.57
PogzMBMidbrain25.65
53
PogzMYMedulla42.54
99.07
PogzOLFOlfactory bulb49.11
64.09
PogzPPons53.89
100
PogzPALPallidum19.77
35.79
PogzRHPRetrohippocampal region14.43
17.56
PogzsAMYStriatum-like amygdalar nuclei14.89
15.98
PogzSTRStriatum8.42
9.47
PogzSTRdStriatum dorsal region4.64
5.58
PogzSTRvStriatum ventral region9.87
9.4
PogzTHThalamus14.76
25.91
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00066708 14 1040 1053 EQQLPVNEETLFQK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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