AutismKB 2.0

Annotation Detail for POGZ


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Basic Information Top
Gene Symbol:POGZ ( KIAA0461,MGC71543,SUHW5,ZNF280E,ZNF635,ZNF635m )
Gene Full Name: pogo transposable element with ZNF domain
Band: 1q21.3
Quick LinksEntrez ID:23126; OMIM: NA; Uniprot ID:POGZ_HUMAN; ENSEMBL ID: ENSG00000143442; HGNC ID: 18801
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst6 / 6231996
fetus62 / 564012109
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult126 / 193912164
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma3 / 17475171
breast (mammary gland) tumor8 / 9417884
cervical tumor2 / 3436658
chondrosarcoma5 / 8282360
colorectal tumor11 / 11424696
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor9 / 26384534
glioma7 / 10688365
head and neck tumor7 / 13630251
kidney tumor2 / 6895929
leukemia8 / 9584283
liver tumor3 / 9635931
lung tumor1 / 1031279
lymphoma1 / 7175513
non-neoplasia3 / 9725030
normal229 / 336030768
ovarian tumor8 / 76682104
pancreatic tumor6 / 10461657
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer8 / 10268077
retinoblastoma0 / 463560 
skin tumor5 / 12494940
soft tissue/muscle tissue tumor6 / 12519147
uterine tumor5 / 9025755
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue3 / 13106228
adrenal gland1 / 3319730
ascites3 / 4001574
bladder0 / 297570 
blood5 / 12347840
bone8 / 71655111
bone marrow0 / 488010 
brain83 / 110098975
cervix2 / 4817141
connective tissue4 / 14925526
ear3 / 16212185
embryonic tissue16 / 21572274
esophagus0 / 202090 
eye11 / 21105452
heart8 / 8962689
intestine19 / 23447281
kidney6 / 21177728
larynx0 / 241450 
liver5 / 20774324
lung25 / 33697474
lymph0 / 442700 
lymph node19 / 91610207
mammary gland11 / 15327171
mouth3 / 6705244
muscle6 / 10771555
nerve2 / 15768126
ovary7 / 10205168
pancreas17 / 21481279
parathyroid1 / 2053948
pharynx3 / 4132872
pituitary gland4 / 16585241
placenta13 / 28082546
prostate10 / 18934552
salivary gland0 / 201550 
skin7 / 21057433
spleen1 / 5395218
stomach2 / 9661920
testis19 / 33044257
thymus3 / 8113136
thyroid2 / 4747342
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus20 / 23287885
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212153_at
Cell line Expression level Expression bar
721_B_lymphoblasts189.9
Adipocyte40.95
AdrenalCortex64.8
Adrenalgland44.25
Amygdala53.8
Appendix57.65
AtrioventricularNode31.35
BDCA4+_DentriticCells75.3
Bonemarrow52
BronchialEpithelialCells17.65
CD105+_Endothelial53.5
CD14+_Monocytes56.4
CD19+_BCells(neg._sel.)88.8
CD33+_Myeloid49.75
CD34+185.95
CD4+_Tcells261
CD56+_NKCells110.8
CD71+_EarlyErythroid53.75
CD8+_Tcells202.45
CardiacMyocytes19.8
Caudatenucleus82.85
Cerebellum101.55
CerebellumPeduncles137
CiliaryGanglion32.7
CingulateCortex123.9
Colorectaladenocarcinoma19.1
DorsalRootGanglion35.7
FetalThyroid101.35
Fetalbrain245.85
Fetalliver28.55
Fetallung70.65
GlobusPallidus52.45
Heart6.5
Hypothalamus111.55
Kidney33.2
Leukemia_chronicMyelogenousK-56252.8
Leukemia_promyelocytic-HL-6060.75
Leukemialymphoblastic(MOLT-4)127.25
Liver23.35
Lung50.85
Lymphnode86.75
Lymphoma_burkitts(Daudi)102.2
Lymphoma_burkitts(Raji)69.5
MedullaOblongata80.8
OccipitalLobe89.2
OlfactoryBulb104.7
Ovary8.9
Pancreas30.2
PancreaticIslet38
ParietalLobe73.35
Pituitary168.75
Placenta55.75
Pons48.9
PrefrontalCortex265.35
Prostate48.4
Salivarygland50.1
SkeletalMuscle57.6
Skin31.75
SmoothMuscle10.75
Spinalcord125.4
SubthalamicNucleus59.35
SuperiorCervicalGanglion29.65
TemporalLobe40.3
Testis45.35
TestisGermCell76.7
TestisIntersitial43.9
TestisLeydigCell52.5
TestisSeminiferousTubule87.55
Thalamus80.6
Thymus67.45
Thyroid57
Tongue54.45
Tonsil81.3
Trachea47.05
TrigeminalGanglion18.2
Uterus49.5
UterusCorpus38.05
WholeBlood61.95
Wholebrain41.6
colon48.7
pineal_day418.08
pineal_night364.24
retina130.775
small_intestine46.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P63219
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.29 ± 0.25
Basal Forebrain10.27 ± 0.21
Basal Part of Pons9.87 ± 0.28
Cerebellar Cortex10.36 ± 0.2
Cerebellar Nuclei10.2 ± 0.23
Claustrum10.52 ± 0.37
Epithalamus10.25 ± 0.36
Frontal Lobe10.06 ± 0.28
Globus Pallidus10.62 ± 0.27
Hypothalamus10 ± 0.29
Insula10.11 ± 0.26
Limbic Lobe10.32 ± 0.4
Mesencephalon10.28 ± 0.33
Myelencephalon10.24 ± 0.33
Occipital Lobe10.61 ± 0.4
Parietal Lobe10.24 ± 0.3
Pontine Tegmentum10.23 ± 0.3
Striatum10.35 ± 0.31
Subthalamus10.14 ± 0.34
Temporal Lobe10.11 ± 0.28
Thalamus10.19 ± 0.27
White Matter11.46 ± 0.31
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
PogzCBCerebellum14.38
38.34
PogzCTXCerebral cortex24.09
23.91
PogzHIPHippocampal region6.76
10.23
PogzHPFHippocampal formation9.36
12.86
PogzHYHypothalamus17.32
20.97
PogzLSXLateral septal complex18.35
24.57
PogzMBMidbrain25.65
53
PogzMYMedulla42.54
99.07
PogzOLFOlfactory bulb49.11
64.09
PogzPPons53.89
100
PogzPALPallidum19.77
35.79
PogzRHPRetrohippocampal region14.43
17.56
PogzsAMYStriatum-like amygdalar nuclei14.89
15.98
PogzSTRStriatum8.42
9.47
PogzSTRdStriatum dorsal region4.64
5.58
PogzSTRvStriatum ventral region9.87
9.4
PogzTHThalamus14.76
25.91
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00066708 14 1040 1053 EQQLPVNEETLFQK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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