Annotation Detail for PHF8


Gene Symbol: | PHF8 ( DKFZp686E0868,JHDM1F,KIAA1111,MRXSSD,ZNF422 ) |
---|---|
Gene Full Name: | PHD finger protein 8 |
Band: | Xp11.22 |
Quick Links | Entrez ID:23133; OMIM: 300560; Uniprot ID:PHF8_HUMAN; ENSEMBL ID: ENSG00000172943; HGNC ID: 20672 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.726110
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
embryoid body | 1 / 70761 | 14 | ![]() |
blastocyst | 9 / 62319 | 144 | ![]() |
fetus | 23 / 564012 | 40 | ![]() |
neonate | 3 / 31097 | 96 | ![]() |
infant | 0 / 23620 | 0 | |
juvenile | 0 / 55556 | 0 | |
adult | 80 / 1939121 | 41 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adrenal tumor | 1 / 12794 | 78 | ![]() |
bladder carcinoma | 1 / 17475 | 57 | ![]() |
breast (mammary gland) tumor | 1 / 94178 | 10 | ![]() |
cervical tumor | 4 / 34366 | 116 | ![]() |
chondrosarcoma | 2 / 82823 | 24 | ![]() |
colorectal tumor | 5 / 114246 | 43 | ![]() |
esophageal tumor | 0 / 17290 | 0 | |
gastrointestinal tumor | 1 / 119369 | 8 | ![]() |
germ cell tumor | 13 / 263845 | 49 | ![]() |
glioma | 0 / 106883 | 0 | |
head and neck tumor | 12 / 136302 | 88 | ![]() |
kidney tumor | 0 / 68959 | 0 | |
leukemia | 6 / 95842 | 62 | ![]() |
liver tumor | 2 / 96359 | 20 | ![]() |
lung tumor | 3 / 103127 | 29 | ![]() |
lymphoma | 1 / 71755 | 13 | ![]() |
non-neoplasia | 0 / 97250 | 0 | |
normal | 113 / 3360307 | 33 | ![]() |
ovarian tumor | 5 / 76682 | 65 | ![]() |
pancreatic tumor | 2 / 104616 | 19 | ![]() |
primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
prostate cancer | 9 / 102680 | 87 | ![]() |
retinoblastoma | 2 / 46356 | 43 | ![]() |
skin tumor | 2 / 124949 | 16 | ![]() |
soft tissue/muscle tissue tumor | 2 / 125191 | 15 | ![]() |
uterine tumor | 2 / 90257 | 22 | ![]() |
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
![]() | |||
adipose tissue | 0 / 13106 | 0 | |
adrenal gland | 2 / 33197 | 60 | ![]() |
ascites | 0 / 40015 | 0 | |
bladder | 2 / 29757 | 67 | ![]() |
blood | 2 / 123478 | 16 | ![]() |
bone | 0 / 71655 | 0 | |
bone marrow | 1 / 48801 | 20 | ![]() |
brain | 16 / 1100989 | 14 | ![]() |
cervix | 4 / 48171 | 83 | ![]() |
connective tissue | 2 / 149255 | 13 | ![]() |
ear | 1 / 16212 | 61 | ![]() |
embryonic tissue | 15 / 215722 | 69 | ![]() |
esophagus | 0 / 20209 | 0 | |
eye | 9 / 211054 | 42 | ![]() |
heart | 1 / 89626 | 11 | ![]() |
intestine | 7 / 234472 | 29 | ![]() |
kidney | 2 / 211777 | 9 | ![]() |
larynx | 0 / 24145 | 0 | |
liver | 3 / 207743 | 14 | ![]() |
lung | 14 / 336974 | 41 | ![]() |
lymph | 1 / 44270 | 22 | ![]() |
lymph node | 14 / 91610 | 152 | ![]() |
mammary gland | 1 / 153271 | 6 | ![]() |
mouth | 9 / 67052 | 134 | ![]() |
muscle | 4 / 107715 | 37 | ![]() |
nerve | 1 / 15768 | 63 | ![]() |
ovary | 5 / 102051 | 48 | ![]() |
pancreas | 2 / 214812 | 9 | ![]() |
parathyroid | 0 / 20539 | 0 | |
pharynx | 0 / 41328 | 0 | |
pituitary gland | 0 / 16585 | 0 | |
placenta | 15 / 280825 | 53 | ![]() |
prostate | 13 / 189345 | 68 | ![]() |
salivary gland | 0 / 20155 | 0 | |
skin | 5 / 210574 | 23 | ![]() |
spleen | 1 / 53952 | 18 | ![]() |
stomach | 3 / 96619 | 31 | ![]() |
testis | 50 / 330442 | 151 | ![]() |
thymus | 4 / 81131 | 49 | ![]() |
thyroid | 3 / 47473 | 63 | ![]() |
tonsil | 0 / 16999 | 0 | |
trachea | 1 / 52413 | 19 | ![]() |
umbilical cord | 3 / 13680 | 219 | ![]() |
uterus | 4 / 232878 | 17 | ![]() |
vascular | 1 / 51780 | 19 | ![]() |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 212916_at
Cell line | Expression level | Expression bar |
---|---|---|
![]() | ||
721_B_lymphoblasts | 10.9 | ![]() |
Adipocyte | 6.6 | ![]() |
AdrenalCortex | 7.95 | ![]() |
Adrenalgland | 6.05 | ![]() |
Amygdala | 6.85 | ![]() |
Appendix | 7.65 | ![]() |
AtrioventricularNode | 5.5 | ![]() |
BDCA4+_DentriticCells | 8.65 | ![]() |
Bonemarrow | 7.8 | ![]() |
BronchialEpithelialCells | 6.5 | ![]() |
CD105+_Endothelial | 7.35 | ![]() |
CD14+_Monocytes | 7.95 | ![]() |
CD19+_BCells(neg._sel.) | 7.9 | ![]() |
CD33+_Myeloid | 10.4 | ![]() |
CD34+ | 13.05 | ![]() |
CD4+_Tcells | 8.3 | ![]() |
CD56+_NKCells | 9.5 | ![]() |
CD71+_EarlyErythroid | 6.85 | ![]() |
CD8+_Tcells | 11.65 | ![]() |
CardiacMyocytes | 10.35 | ![]() |
Caudatenucleus | 6.5 | ![]() |
Cerebellum | 5.85 | ![]() |
CerebellumPeduncles | 8.15 | ![]() |
CiliaryGanglion | 5.05 | ![]() |
CingulateCortex | 7.2 | ![]() |
Colorectaladenocarcinoma | 7.1 | ![]() |
DorsalRootGanglion | 5.5 | ![]() |
FetalThyroid | 7.05 | ![]() |
Fetalbrain | 7.1 | ![]() |
Fetalliver | 6.2 | ![]() |
Fetallung | 6.7 | ![]() |
GlobusPallidus | 5.3 | ![]() |
Heart | 10.1 | ![]() |
Hypothalamus | 7.4 | ![]() |
Kidney | 6.05 | ![]() |
Leukemia_chronicMyelogenousK-562 | 7.15 | ![]() |
Leukemia_promyelocytic-HL-60 | 6.25 | ![]() |
Leukemialymphoblastic(MOLT-4) | 7.55 | ![]() |
Liver | 9.4 | ![]() |
Lung | 7.7 | ![]() |
Lymphnode | 6.8 | ![]() |
Lymphoma_burkitts(Daudi) | 9.25 | ![]() |
Lymphoma_burkitts(Raji) | 10.3 | ![]() |
MedullaOblongata | 6.6 | ![]() |
OccipitalLobe | 6.3 | ![]() |
OlfactoryBulb | 5.75 | ![]() |
Ovary | 4.8 | ![]() |
Pancreas | 5.75 | ![]() |
PancreaticIslet | 7.75 | ![]() |
ParietalLobe | 7.65 | ![]() |
Pituitary | 8.5 | ![]() |
Placenta | 7.7 | ![]() |
Pons | 6.85 | ![]() |
PrefrontalCortex | 8.55 | ![]() |
Prostate | 8.65 | ![]() |
Salivarygland | 5.8 | ![]() |
SkeletalMuscle | 8.7 | ![]() |
Skin | 6 | ![]() |
SmoothMuscle | 7.6 | ![]() |
Spinalcord | 7.65 | ![]() |
SubthalamicNucleus | 6.5 | ![]() |
SuperiorCervicalGanglion | 9.35 | ![]() |
TemporalLobe | 6.6 | ![]() |
Testis | 21.85 | ![]() |
TestisGermCell | 7.15 | ![]() |
TestisIntersitial | 6.1 | ![]() |
TestisLeydigCell | 7.55 | ![]() |
TestisSeminiferousTubule | 7.05 | ![]() |
Thalamus | 7.25 | ![]() |
Thymus | 16.55 | ![]() |
Thyroid | 9.3 | ![]() |
Tongue | 7.15 | ![]() |
Tonsil | 7.05 | ![]() |
Trachea | 5.85 | ![]() |
TrigeminalGanglion | 7.95 | ![]() |
Uterus | 5.8 | ![]() |
UterusCorpus | 6.75 | ![]() |
WholeBlood | 8.1 | ![]() |
Wholebrain | 5.35 | ![]() |
colon | 6.85 | ![]() |
pineal_day | 9.94 | ![]() |
pineal_night | 12.18 | ![]() |
retina | 8.875 | ![]() |
small_intestine | 6.45 | ![]() |
- Probe name: CUST_509_PI416408490
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 6.72 ± 0.43 | ![]() ![]() ![]() |
Basal Forebrain | 7.08 ± 0.19 | ![]() ![]() ![]() |
Basal Part of Pons | 6.53 ± 0.35 | ![]() ![]() ![]() |
Cerebellar Cortex | 6.74 ± 0.22 | ![]() ![]() ![]() |
Cerebellar Nuclei | 6.9 ± 0.38 | ![]() ![]() ![]() |
Claustrum | 7 ± 0.42 | ![]() ![]() ![]() |
Epithalamus | 7.12 ± 0.35 | ![]() ![]() ![]() |
Frontal Lobe | 6.54 ± 0.39 | ![]() ![]() ![]() |
Globus Pallidus | 7.62 ± 0.14 | ![]() ![]() ![]() |
Hypothalamus | 6.66 ± 0.34 | ![]() ![]() ![]() |
Insula | 6.59 ± 0.25 | ![]() ![]() ![]() |
Limbic Lobe | 6.63 ± 0.38 | ![]() ![]() ![]() |
Mesencephalon | 6.91 ± 0.34 | ![]() ![]() ![]() |
Myelencephalon | 6.78 ± 0.4 | ![]() ![]() ![]() |
Occipital Lobe | 7.06 ± 0.41 | ![]() ![]() ![]() |
Parietal Lobe | 6.79 ± 0.34 | ![]() ![]() ![]() |
Pontine Tegmentum | 6.79 ± 0.44 | ![]() ![]() ![]() |
Striatum | 6.93 ± 0.45 | ![]() ![]() ![]() |
Subthalamus | 6.76 ± 0.23 | ![]() ![]() ![]() |
Temporal Lobe | 6.69 ± 0.35 | ![]() ![]() ![]() |
Thalamus | 6.79 ± 0.3 | ![]() ![]() ![]() |
White Matter | 8.15 ± 0.47 | ![]() ![]() ![]() |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
PAp00480084 | 22 | 42 | 63 | AADIDLYHCPNCEVLHGPSIMK | Peptide Atlas |