Annotation Detail for XPO6
Basic Information Top
Gene Symbol: | XPO6 ( EXP6,FLJ22519,KIAA0370,RANBP20 ) |
---|---|
Gene Full Name: | exportin 6 |
Band: | 16p11.2 |
Quick Links | Entrez ID:23214; OMIM: 608411; Uniprot ID:XPO6_HUMAN; ENSEMBL ID: ENSG00000169180; HGNC ID: 19733 |
Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.460468
Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
---|---|---|---|
embryoid body | 7 / 70761 | 98 | |
blastocyst | 7 / 62319 | 112 | |
fetus | 53 / 564012 | 93 | |
neonate | 5 / 31097 | 160 | |
infant | 1 / 23620 | 42 | |
juvenile | 8 / 55556 | 143 | |
adult | 293 / 1939121 | 151 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 211982_x_at
Cell line | Expression level | Expression bar |
---|---|---|
721_B_lymphoblasts | 579.15 | |
Adipocyte | 73.55 | |
AdrenalCortex | 91.4 | |
Adrenalgland | 81.15 | |
Amygdala | 133.45 | |
Appendix | 76.2 | |
AtrioventricularNode | 27.6 | |
BDCA4+_DentriticCells | 343.85 | |
Bonemarrow | 114.65 | |
BronchialEpithelialCells | 97.05 | |
CD105+_Endothelial | 399.85 | |
CD14+_Monocytes | 438.25 | |
CD19+_BCells(neg._sel.) | 635.9 | |
CD33+_Myeloid | 257.4 | |
CD34+ | 317.75 | |
CD4+_Tcells | 983.8 | |
CD56+_NKCells | 628.75 | |
CD71+_EarlyErythroid | 156.5 | |
CD8+_Tcells | 784.9 | |
CardiacMyocytes | 130.1 | |
Caudatenucleus | 91.3 | |
Cerebellum | 78.65 | |
CerebellumPeduncles | 108.95 | |
CiliaryGanglion | 50.55 | |
CingulateCortex | 124.25 | |
Colorectaladenocarcinoma | 102.65 | |
DorsalRootGanglion | 38.85 | |
FetalThyroid | 93.75 | |
Fetalbrain | 99.9 | |
Fetalliver | 54 | |
Fetallung | 79.9 | |
GlobusPallidus | 73.35 | |
Heart | 55.25 | |
Hypothalamus | 168.75 | |
Kidney | 61.15 | |
Leukemia_chronicMyelogenousK-562 | 86.9 | |
Leukemia_promyelocytic-HL-60 | 170.7 | |
Leukemialymphoblastic(MOLT-4) | 134.55 | |
Liver | 126.95 | |
Lung | 147.65 | |
Lymphnode | 129.8 | |
Lymphoma_burkitts(Daudi) | 140.45 | |
Lymphoma_burkitts(Raji) | 345 | |
MedullaOblongata | 122 | |
OccipitalLobe | 91.5 | |
OlfactoryBulb | 78.35 | |
Ovary | 43.95 | |
Pancreas | 65.95 | |
PancreaticIslet | 57.75 | |
ParietalLobe | 102.15 | |
Pituitary | 106.4 | |
Placenta | 188 | |
Pons | 94.45 | |
PrefrontalCortex | 251.4 | |
Prostate | 128.45 | |
Salivarygland | 76.8 | |
SkeletalMuscle | 65.55 | |
Skin | 42.35 | |
SmoothMuscle | 204 | |
Spinalcord | 132 | |
SubthalamicNucleus | 91.05 | |
SuperiorCervicalGanglion | 97.8 | |
TemporalLobe | 93.25 | |
Testis | 162.2 | |
TestisGermCell | 212.1 | |
TestisIntersitial | 194.15 | |
TestisLeydigCell | 146.45 | |
TestisSeminiferousTubule | 175.15 | |
Thalamus | 103.75 | |
Thymus | 128.85 | |
Thyroid | 120.35 | |
Tongue | 68.15 | |
Tonsil | 123.4 | |
Trachea | 68 | |
TrigeminalGanglion | 94.4 | |
Uterus | 71.15 | |
UterusCorpus | 68.7 | |
WholeBlood | 2703.25 | |
Wholebrain | 153.1 | |
colon | 104.4 | |
pineal_day | 148.82 | |
pineal_night | 145.8 | |
retina | 123.15 | |
small_intestine | 105.95 |
Human Whole Brain Microarrayview in Allen Brain Atlas
- Probe name: CUST_7219_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue | Expression(mean ± stddev) | Expression Bar |
---|---|---|
Amygdala | 4.19 ± 0.38 | |
Basal Forebrain | 3.57 ± 0.59 | |
Basal Part of Pons | 3.94 ± 0.48 | |
Cerebellar Cortex | 4.07 ± 0.63 | |
Cerebellar Nuclei | 3.79 ± 0.58 | |
Claustrum | 4.05 ± 0.91 | |
Epithalamus | 3.91 ± 0.56 | |
Frontal Lobe | 4.2 ± 0.56 | |
Globus Pallidus | 4.03 ± 0.6 | |
Hypothalamus | 3.97 ± 0.77 | |
Insula | 4.31 ± 0.52 | |
Limbic Lobe | 4.18 ± 0.54 | |
Mesencephalon | 4.02 ± 0.61 | |
Myelencephalon | 4.06 ± 0.58 | |
Occipital Lobe | 3.74 ± 0.54 | |
Parietal Lobe | 4.1 ± 0.47 | |
Pontine Tegmentum | 4.12 ± 0.57 | |
Striatum | 3.87 ± 0.57 | |
Subthalamus | 4.29 ± 0.54 | |
Temporal Lobe | 4.16 ± 0.58 | |
Thalamus | 3.92 ± 0.58 | |
White Matter | 4.86 ± 0.26 |
Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
---|---|---|---|---|---|
XPO6_HUMAN_2 | 8 | 2 | 9 | ASEEASLR | PRIDE |