AutismKB 2.0

Annotation Detail for NUP210


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Basic Information Top
Gene Symbol:NUP210 ( FLJ22389,GP210,KIAA0906,POM210 )
Gene Full Name: nucleoporin 210kDa
Band: 3p25.1
Quick LinksEntrez ID:23225; OMIM: 607703; Uniprot ID:PO210_HUMAN; ENSEMBL ID: ENSG00000132182; HGNC ID: 30052
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst11 / 62319176
fetus26 / 56401246
neonate0 / 310970 
infant1 / 2362042
juvenile3 / 5555653
adult156 / 193912180
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma0 / 174750 
breast (mammary gland) tumor12 / 94178127
cervical tumor2 / 3436658
chondrosarcoma1 / 8282312
colorectal tumor20 / 114246175
esophageal tumor0 / 172900 
gastrointestinal tumor14 / 119369117
germ cell tumor19 / 26384572
glioma13 / 106883121
head and neck tumor9 / 13630266
kidney tumor0 / 689590 
leukemia22 / 95842229
liver tumor3 / 9635931
lung tumor4 / 10312738
lymphoma6 / 7175583
non-neoplasia3 / 9725030
normal185 / 336030755
ovarian tumor4 / 7668252
pancreatic tumor5 / 10461647
primitive neuroectodermal tumor of the CNS10 / 12568079
prostate cancer50 / 102680486
retinoblastoma4 / 4635686
skin tumor10 / 12494980
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor10 / 90257110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland2 / 3319760
ascites0 / 400150 
bladder1 / 2975733
blood14 / 123478113
bone0 / 716550 
bone marrow7 / 48801143
brain38 / 110098934
cervix4 / 4817183
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue16 / 21572274
esophagus0 / 202090 
eye12 / 21105456
heart4 / 8962644
intestine42 / 234472179
kidney2 / 2117779
larynx0 / 241450 
liver7 / 20774333
lung120 / 336974356
lymph3 / 4427067
lymph node50 / 91610545
mammary gland12 / 15327178
mouth0 / 670520 
muscle0 / 1077150 
nerve1 / 1576863
ovary9 / 10205188
pancreas17 / 21481279
parathyroid1 / 2053948
pharynx5 / 41328120
pituitary gland3 / 16585180
placenta12 / 28082542
prostate56 / 189345295
salivary gland0 / 201550 
skin12 / 21057456
spleen4 / 5395274
stomach13 / 96619134
testis16 / 33044248
thymus6 / 8113173
thyroid3 / 4747363
tonsil3 / 16999176
trachea0 / 524130 
umbilical cord0 / 136800 
uterus12 / 23287851
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212316_at
Cell line Expression level Expression bar
721_B_lymphoblasts140.35
Adipocyte6.2
AdrenalCortex7.75
Adrenalgland5.2
Amygdala7.75
Appendix7.25
AtrioventricularNode5.75
BDCA4+_DentriticCells128.65
Bonemarrow24.9
BronchialEpithelialCells6.1
CD105+_Endothelial54.2
CD14+_Monocytes12.35
CD19+_BCells(neg._sel.)41.05
CD33+_Myeloid27.25
CD34+77.5
CD4+_Tcells190.55
CD56+_NKCells59.4
CD71+_EarlyErythroid28.75
CD8+_Tcells154.3
CardiacMyocytes13.75
Caudatenucleus5.9
Cerebellum6.85
CerebellumPeduncles8.7
CiliaryGanglion5.25
CingulateCortex6.8
Colorectaladenocarcinoma52.85
DorsalRootGanglion5.45
FetalThyroid6.5
Fetalbrain7.9
Fetalliver13.6
Fetallung5.05
GlobusPallidus5.05
Heart10.25
Hypothalamus7.25
Kidney6.95
Leukemia_chronicMyelogenousK-56243.05
Leukemia_promyelocytic-HL-6034.5
Leukemialymphoblastic(MOLT-4)21.45
Liver14.35
Lung11.7
Lymphnode22.55
Lymphoma_burkitts(Daudi)19.35
Lymphoma_burkitts(Raji)245.7
MedullaOblongata5.9
OccipitalLobe6.35
OlfactoryBulb5.3
Ovary4.75
Pancreas6.45
PancreaticIslet9.15
ParietalLobe7.8
Pituitary8.6
Placenta6.4
Pons6.75
PrefrontalCortex9.05
Prostate8.95
Salivarygland5.75
SkeletalMuscle8.85
Skin5.8
SmoothMuscle7.15
Spinalcord6.8
SubthalamicNucleus6.1
SuperiorCervicalGanglion8.8
TemporalLobe6.05
Testis6.6
TestisGermCell7.95
TestisIntersitial10.15
TestisLeydigCell7.2
TestisSeminiferousTubule6
Thalamus5.8
Thymus48.15
Thyroid8.8
Tongue7.35
Tonsil21.9
Trachea5.4
TrigeminalGanglion7.25
Uterus5.8
UterusCorpus6.75
WholeBlood30.45
Wholebrain6.3
colon6.8
pineal_day8.08
pineal_night7.72
retina8.1
small_intestine8.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P282000
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.4 ± 0.88
Basal Forebrain3.35 ± 0.55
Basal Part of Pons3.07 ± 0.74
Cerebellar Cortex3.77 ± 0.36
Cerebellar Nuclei3.16 ± 0.74
Claustrum3.51 ± 0.77
Epithalamus3.04 ± 0.87
Frontal Lobe3.15 ± 0.64
Globus Pallidus3.75 ± 0.99
Hypothalamus3.15 ± 0.33
Insula2.89 ± 0.74
Limbic Lobe3.19 ± 0.69
Mesencephalon3.55 ± 0.7
Myelencephalon3.38 ± 0.73
Occipital Lobe3.74 ± 0.64
Parietal Lobe3.39 ± 0.73
Pontine Tegmentum3.3 ± 0.64
Striatum3.44 ± 0.79
Subthalamus3.67 ± 0.64
Temporal Lobe3.24 ± 0.77
Thalamus3.47 ± 0.74
White Matter3.55 ± 0.58
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Nup210CBCerebellum9
8.42
Nup210CTXCerebral cortex14.3
9.52
Nup210HIPHippocampal region10.27
9.04
Nup210HPFHippocampal formation12.36
9.93
Nup210HYHypothalamus14.97
9.68
Nup210LSXLateral septal complex6.6
4.1
Nup210MBMidbrain9.71
7.62
Nup210MYMedulla14.14
13.18
Nup210OLFOlfactory bulb22.87
17.1
Nup210PPons15.28
13.55
Nup210PALPallidum7.33
5
Nup210RHPRetrohippocampal region17.13
12
Nup210sAMYStriatum-like amygdalar nuclei5.79
3.33
Nup210STRStriatum5.1
3.2
Nup210STRdStriatum dorsal region3.41
2.19
Nup210STRvStriatum ventral region8.18
4.79
Nup210THThalamus13.14
9.2
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00000883 18 109 126 CDAIVDLIHDIQIVSTTR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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