AutismKB 2.0

Annotation Detail for CAMTA1


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Basic Information Top
Gene Symbol:CAMTA1 ( KIAA0833 )
Gene Full Name: calmodulin binding transcription activator 1
Band: 1p36.31-p36.23
Quick LinksEntrez ID:23261; OMIM: 611501; Uniprot ID:CMTA1_HUMAN; ENSEMBL ID: ENSG00000171735; HGNC ID: 18806
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst0 / 623190 
fetus46 / 56401281
neonate0 / 310970 
infant3 / 23620127
juvenile2 / 5555635
adult140 / 193912172
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor7 / 9417874
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor12 / 26384545
glioma7 / 10688365
head and neck tumor0 / 1363020 
kidney tumor4 / 6895958
leukemia5 / 9584252
liver tumor1 / 9635910
lung tumor3 / 10312729
lymphoma1 / 7175513
non-neoplasia3 / 9725030
normal212 / 336030763
ovarian tumor9 / 76682117
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor64 / 125191511
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood4 / 12347832
bone3 / 7165541
bone marrow4 / 4880181
brain94 / 110098985
cervix0 / 481710 
connective tissue60 / 149255401
ear0 / 162120 
embryonic tissue11 / 21572250
esophagus0 / 202090 
eye23 / 211054108
heart8 / 8962689
intestine5 / 23447221
kidney25 / 211777118
larynx0 / 241450 
liver3 / 20774314
lung36 / 336974106
lymph0 / 442700 
lymph node4 / 9161043
mammary gland8 / 15327152
mouth0 / 670520 
muscle9 / 10771583
nerve1 / 1576863
ovary9 / 10205188
pancreas2 / 2148129
parathyroid3 / 20539146
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta7 / 28082524
prostate6 / 18934531
salivary gland1 / 2015549
skin3 / 21057414
spleen2 / 5395237
stomach1 / 9661910
testis12 / 33044236
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus4 / 23287817
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213268_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.55
Adipocyte5.75
AdrenalCortex6.35
Adrenalgland4.95
Amygdala153.35
Appendix6.5
AtrioventricularNode4.65
BDCA4+_DentriticCells6.15
Bonemarrow5.9
BronchialEpithelialCells5.55
CD105+_Endothelial5.85
CD14+_Monocytes6.15
CD19+_BCells(neg._sel.)6.15
CD33+_Myeloid7.35
CD34+7.25
CD4+_Tcells6.2
CD56+_NKCells6.85
CD71+_EarlyErythroid5.4
CD8+_Tcells5.5
CardiacMyocytes7.9
Caudatenucleus116.15
Cerebellum74.95
CerebellumPeduncles133.05
CiliaryGanglion4.65
CingulateCortex211.85
Colorectaladenocarcinoma5.8
DorsalRootGanglion6.55
FetalThyroid5.65
Fetalbrain211.85
Fetalliver5.1
Fetallung4.85
GlobusPallidus103.45
Heart7.8
Hypothalamus218.45
Kidney4.85
Leukemia_chronicMyelogenousK-5625.3
Leukemia_promyelocytic-HL-605.15
Leukemialymphoblastic(MOLT-4)4.6
Liver8.75
Lung6.4
Lymphnode4.95
Lymphoma_burkitts(Daudi)7.55
Lymphoma_burkitts(Raji)8.4
MedullaOblongata258.05
OccipitalLobe166.9
OlfactoryBulb4.55
Ovary3.9
Pancreas4.75
PancreaticIslet7.3
ParietalLobe119.15
Pituitary7.3
Placenta5.9
Pons124.1
PrefrontalCortex324.6
Prostate6.7
Salivarygland4.7
SkeletalMuscle7.05
Skin4.6
SmoothMuscle6.55
Spinalcord38.75
SubthalamicNucleus224.9
SuperiorCervicalGanglion6.85
TemporalLobe174.9
Testis5
TestisGermCell4.85
TestisIntersitial4.95
TestisLeydigCell6.55
TestisSeminiferousTubule5
Thalamus267.45
Thymus4.5
Thyroid7.2
Tongue5.85
Tonsil5.65
Trachea4.85
TrigeminalGanglion6
Uterus4.7
UterusCorpus5.6
WholeBlood6.3
Wholebrain108.7
colon5.7
pineal_day259.64
pineal_night257.44
retina7.6
small_intestine5.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P220921
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.77 ± 0.53
Basal Forebrain7.01 ± 0.18
Basal Part of Pons7.9 ± 0.17
Cerebellar Cortex7.16 ± 0.45
Cerebellar Nuclei7.5 ± 0.36
Claustrum7.29 ± 0.5
Epithalamus6.46 ± 0.66
Frontal Lobe7.17 ± 0.45
Globus Pallidus6.42 ± 0.26
Hypothalamus7.5 ± 0.53
Insula7.05 ± 0.39
Limbic Lobe7.03 ± 0.36
Mesencephalon7.07 ± 0.47
Myelencephalon7.17 ± 0.49
Occipital Lobe7.56 ± 0.39
Parietal Lobe7.44 ± 0.39
Pontine Tegmentum7.18 ± 0.29
Striatum7.16 ± 0.45
Subthalamus7.52 ± 0.29
Temporal Lobe7.18 ± 0.41
Thalamus7.38 ± 0.45
White Matter5.87 ± 0.4
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Camta1CBCerebellum37.81
42.02
Camta1CTXCerebral cortex100
95.4
Camta1HIPHippocampal region88.53
100
Camta1HPFHippocampal formation88.65
100
Camta1HYHypothalamus82.9
79.86
Camta1LSXLateral septal complex45.71
39.67
Camta1MBMidbrain86.5
94.63
Camta1MYMedulla82.79
100
Camta1OLFOlfactory bulb83.57
79.08
Camta1PPons78.53
100
Camta1PALPallidum84.74
91.7
Camta1RHPRetrohippocampal region91.55
86.04
Camta1sAMYStriatum-like amygdalar nuclei100
92.89
Camta1STRStriatum47.55
39.47
Camta1STRdStriatum dorsal region36.78
29.35
Camta1STRvStriatum ventral region56.27
43.15
Camta1THThalamus84.23
79.51
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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