AutismKB 2.0

Annotation Detail for NUP160


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Basic Information Top
Gene Symbol:NUP160 ( DKFZp686M14102,MGC150678,MGC150679 )
Gene Full Name: nucleoporin 160kDa
Band: 11p11.2
Quick LinksEntrez ID:23279; OMIM: 607614; Uniprot ID:NU160_HUMAN; ENSEMBL ID: ENSG00000030066; HGNC ID: 18017
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst6 / 6231996
fetus24 / 56401242
neonate1 / 3109732
infant0 / 236200 
juvenile1 / 5555617
adult80 / 193912141
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma1 / 1747557
breast (mammary gland) tumor2 / 9417821
cervical tumor2 / 3436658
chondrosarcoma2 / 8282324
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor7 / 11936958
germ cell tumor23 / 26384587
glioma2 / 10688318
head and neck tumor7 / 13630251
kidney tumor0 / 689590 
leukemia4 / 9584241
liver tumor1 / 9635910
lung tumor10 / 10312796
lymphoma0 / 717550 
non-neoplasia4 / 9725041
normal118 / 336030735
ovarian tumor2 / 7668226
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma7 / 46356151
skin tumor8 / 12494964
soft tissue/muscle tissue tumor5 / 12519139
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland2 / 3319760
ascites1 / 4001524
bladder2 / 2975767
blood3 / 12347824
bone7 / 7165597
bone marrow3 / 4880161
brain23 / 110098920
cervix2 / 4817141
connective tissue5 / 14925533
ear1 / 1621261
embryonic tissue21 / 21572297
esophagus0 / 202090 
eye11 / 21105452
heart2 / 8962622
intestine6 / 23447225
kidney1 / 2117774
larynx0 / 241450 
liver13 / 20774362
lung16 / 33697447
lymph0 / 442700 
lymph node6 / 9161065
mammary gland4 / 15327126
mouth5 / 6705274
muscle6 / 10771555
nerve0 / 157680 
ovary2 / 10205119
pancreas4 / 21481218
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta11 / 28082539
prostate1 / 1893455
salivary gland1 / 2015549
skin10 / 21057447
spleen0 / 539520 
stomach6 / 9661962
testis37 / 330442111
thymus4 / 8113149
thyroid2 / 4747342
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus6 / 23287825
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212709_at
Cell line Expression level Expression bar
721_B_lymphoblasts40.1
Adipocyte9.35
AdrenalCortex17.05
Adrenalgland9.3
Amygdala9.4
Appendix15.55
AtrioventricularNode14.55
BDCA4+_DentriticCells10.95
Bonemarrow13.5
BronchialEpithelialCells10.85
CD105+_Endothelial39.45
CD14+_Monocytes11.25
CD19+_BCells(neg._sel.)11.35
CD33+_Myeloid12.55
CD34+13.2
CD4+_Tcells12.25
CD56+_NKCells10.95
CD71+_EarlyErythroid15.2
CD8+_Tcells15.3
CardiacMyocytes23.6
Caudatenucleus9.05
Cerebellum7.75
CerebellumPeduncles13.75
CiliaryGanglion10.85
CingulateCortex10.95
Colorectaladenocarcinoma23
DorsalRootGanglion10.35
FetalThyroid12.9
Fetalbrain11.3
Fetalliver11.2
Fetallung13
GlobusPallidus9.15
Heart19.95
Hypothalamus9.65
Kidney10.1
Leukemia_chronicMyelogenousK-56227.65
Leukemia_promyelocytic-HL-6014.15
Leukemialymphoblastic(MOLT-4)21.6
Liver17.5
Lung10.6
Lymphnode13.1
Lymphoma_burkitts(Daudi)14.6
Lymphoma_burkitts(Raji)22.6
MedullaOblongata8.4
OccipitalLobe8.6
OlfactoryBulb8.25
Ovary9
Pancreas9.4
PancreaticIslet11.3
ParietalLobe12.2
Pituitary11.9
Placenta22.4
Pons10.45
PrefrontalCortex9.75
Prostate17.1
Salivarygland10.1
SkeletalMuscle18.55
Skin10.95
SmoothMuscle13.4
Spinalcord10.35
SubthalamicNucleus10.5
SuperiorCervicalGanglion23.2
TemporalLobe9.65
Testis9.95
TestisGermCell8.35
TestisIntersitial10.35
TestisLeydigCell12.25
TestisSeminiferousTubule9.55
Thalamus11
Thymus18.75
Thyroid42.75
Tongue15.55
Tonsil12.65
Trachea8.8
TrigeminalGanglion18.4
Uterus28.4
UterusCorpus12.45
WholeBlood19.25
Wholebrain6.9
colon49.15
pineal_day12.22
pineal_night12.82
retina13.825
small_intestine24.05
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P922606
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.16 ± 0.95
Basal Forebrain2.75 ± 0.39
Basal Part of Pons2.46 ± 0.25
Cerebellar Cortex3.43 ± 0.43
Cerebellar Nuclei2.92 ± 0.65
Claustrum3.29 ± 0.7
Epithalamus2.86 ± 0.64
Frontal Lobe2.86 ± 0.72
Globus Pallidus2.85 ± 0.57
Hypothalamus2.98 ± 0.72
Insula2.86 ± 0.46
Limbic Lobe2.68 ± 0.68
Mesencephalon2.97 ± 0.67
Myelencephalon2.88 ± 0.71
Occipital Lobe2.9 ± 0.74
Parietal Lobe2.79 ± 0.63
Pontine Tegmentum2.9 ± 0.64
Striatum2.6 ± 0.79
Subthalamus2.95 ± 0.72
Temporal Lobe2.8 ± 0.74
Thalamus2.8 ± 0.66
White Matter3.64 ± 0.7
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
NU160_HUMAN_1100 26 1100 1125 LIRPEYAWIVQPVSGAVYDRPGASPK PRIDE
NU160_HUMAN_2 8 2 9 AAAGALER PRIDE
PAp00009973 20 455 474 EMYLQSLFTPGQFTNEALCK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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