AutismKB 2.0

Annotation Detail for IQCE


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Basic Information Top
Gene Symbol:IQCE ( 1700028P05Rik,KIAA1023,MGC41907 )
Gene Full Name: IQ motif containing E
Band: 7p22.3
Quick LinksEntrez ID:23288; OMIM: NA; Uniprot ID:IQCE_HUMAN; ENSEMBL ID: ENSG00000106012; HGNC ID: 29171
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst1 / 6231916
fetus9 / 56401215
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult57 / 193912129
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor8 / 11424670
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor5 / 26384518
glioma8 / 10688374
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal87 / 336030725
ovarian tumor1 / 7668213
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer5 / 10268048
retinoblastoma0 / 463560 
skin tumor8 / 12494964
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor10 / 90257110
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites3 / 4001574
bladder1 / 2975733
blood0 / 1234780 
bone2 / 7165527
bone marrow0 / 488010 
brain25 / 110098922
cervix3 / 4817162
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue2 / 2157229
esophagus0 / 202090 
eye7 / 21105433
heart0 / 896260 
intestine13 / 23447255
kidney9 / 21177742
larynx0 / 241450 
liver2 / 2077439
lung16 / 33697447
lymph0 / 442700 
lymph node0 / 916100 
mammary gland2 / 15327113
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary1 / 1020519
pancreas4 / 21481218
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta4 / 28082514
prostate7 / 18934536
salivary gland0 / 201550 
skin16 / 21057475
spleen2 / 5395237
stomach3 / 9661931
testis21 / 33044263
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus17 / 23287872
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217124_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.25
Adipocyte5.4
AdrenalCortex6.05
Adrenalgland4.75
Amygdala5.65
Appendix5.85
AtrioventricularNode4.75
BDCA4+_DentriticCells6.35
Bonemarrow5.6
BronchialEpithelialCells5.25
CD105+_Endothelial5.4
CD14+_Monocytes5.7
CD19+_BCells(neg._sel.)5.75
CD33+_Myeloid7
CD34+6.85
CD4+_Tcells5.8
CD56+_NKCells7.25
CD71+_EarlyErythroid5.15
CD8+_Tcells5.05
CardiacMyocytes7.5
Caudatenucleus4.9
Cerebellum4.45
CerebellumPeduncles6.4
CiliaryGanglion4.35
CingulateCortex5.7
Colorectaladenocarcinoma5.45
DorsalRootGanglion5.05
FetalThyroid5.4
Fetalbrain5.3
Fetalliver4.8
Fetallung4.4
GlobusPallidus4.2
Heart7.45
Hypothalamus5.75
Kidney4.7
Leukemia_chronicMyelogenousK-5624.9
Leukemia_promyelocytic-HL-604.75
Leukemialymphoblastic(MOLT-4)4.3
Liver7.3
Lung5.85
Lymphnode4.65
Lymphoma_burkitts(Daudi)7.05
Lymphoma_burkitts(Raji)7.75
MedullaOblongata4.95
OccipitalLobe4.8
OlfactoryBulb4.3
Ovary3.8
Pancreas4.4
PancreaticIslet5.8
ParietalLobe5.95
Pituitary6.35
Placenta5.55
Pons5.35
PrefrontalCortex6.6
Prostate6.25
Salivarygland4.45
SkeletalMuscle7.1
Skin5.7
SmoothMuscle6.05
Spinalcord5.8
SubthalamicNucleus5.35
SuperiorCervicalGanglion8.4
TemporalLobe5.1
Testis31.45
TestisGermCell7.05
TestisIntersitial28.05
TestisLeydigCell23.75
TestisSeminiferousTubule12.2
Thalamus5.55
Thymus4.1
Thyroid6.7
Tongue5.6
Tonsil5.35
Trachea4.5
TrigeminalGanglion7.05
Uterus4.35
UterusCorpus5
WholeBlood5.9
Wholebrain4.95
colon5.4
pineal_day6.68
pineal_night6.54
retina7.075
small_intestine5.15
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P19852
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.63 ± 0.21
Basal Forebrain8.81 ± 0.19
Basal Part of Pons8.7 ± 0.16
Cerebellar Cortex8.46 ± 0.15
Cerebellar Nuclei8.38 ± 0.39
Claustrum8.67 ± 0.32
Epithalamus9.17 ± 0.47
Frontal Lobe8.72 ± 0.31
Globus Pallidus8.62 ± 0.41
Hypothalamus8.67 ± 0.33
Insula8.92 ± 0.29
Limbic Lobe8.74 ± 0.27
Mesencephalon8.68 ± 0.31
Myelencephalon8.72 ± 0.33
Occipital Lobe8.83 ± 0.25
Parietal Lobe8.86 ± 0.26
Pontine Tegmentum8.61 ± 0.23
Striatum8.7 ± 0.33
Subthalamus8.71 ± 0.2
Temporal Lobe8.74 ± 0.25
Thalamus8.57 ± 0.26
White Matter7.92 ± 0.2
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
IqceCBCerebellum5.8
5.64
IqceCTXCerebral cortex18.21
12.9
IqceHIPHippocampal region13.59
12.73
IqceHPFHippocampal formation12.74
10.8
IqceHYHypothalamus4.86
3.83
IqceLSXLateral septal complex10.89
7.76
IqceMBMidbrain2.49
2.28
IqceMYMedulla5.8
5.65
IqceOLFOlfactory bulb20.9
16.39
IqcePPons3.59
3.34
IqcePALPallidum6.92
5.69
IqceRHPRetrohippocampal region11.49
8.19
IqcesAMYStriatum-like amygdalar nuclei9.19
5.4
IqceSTRStriatum4.84
3.27
IqceSTRdStriatum dorsal region1.14
0.81
IqceSTRvStriatum ventral region10.33
6.36
IqceTHThalamus14.73
11.33
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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