AutismKB 2.0

Annotation Detail for C22orf9


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Basic Information Top
Gene Symbol:C22orf9 ( - )
Gene Full Name: chromosome 22 open reading frame 9
Band: 22q13.31
Quick LinksEntrez ID:23313; OMIM: NA; Uniprot ID:CV009_HUMAN; ENSEMBL ID: ENSG00000100364; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst2 / 6231932
fetus33 / 56401258
neonate5 / 31097160
infant1 / 2362042
juvenile3 / 5555653
adult145 / 193912174
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor4 / 9417842
cervical tumor1 / 3436629
chondrosarcoma8 / 8282396
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor6 / 11936950
germ cell tumor21 / 26384579
glioma18 / 106883168
head and neck tumor6 / 13630244
kidney tumor7 / 68959101
leukemia14 / 95842146
liver tumor7 / 9635972
lung tumor4 / 10312738
lymphoma0 / 717550 
non-neoplasia7 / 9725071
normal231 / 336030768
ovarian tumor2 / 7668226
pancreatic tumor7 / 10461666
primitive neuroectodermal tumor of the CNS7 / 12568055
prostate cancer6 / 10268058
retinoblastoma0 / 463560 
skin tumor14 / 124949112
soft tissue/muscle tissue tumor10 / 12519179
uterine tumor4 / 9025744
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites3 / 4001574
bladder3 / 29757100
blood19 / 123478153
bone6 / 7165583
bone marrow2 / 4880140
brain114 / 1100989103
cervix1 / 4817120
connective tissue7 / 14925546
ear0 / 162120 
embryonic tissue15 / 21572269
esophagus1 / 2020949
eye10 / 21105447
heart9 / 89626100
intestine15 / 23447263
kidney10 / 21177747
larynx0 / 241450 
liver6 / 20774328
lung25 / 33697474
lymph0 / 442700 
lymph node11 / 91610120
mammary gland8 / 15327152
mouth0 / 670520 
muscle2 / 10771518
nerve4 / 15768253
ovary7 / 10205168
pancreas9 / 21481241
parathyroid1 / 2053948
pharynx4 / 4132896
pituitary gland0 / 165850 
placenta3 / 28082510
prostate15 / 18934579
salivary gland3 / 20155148
skin22 / 210574104
spleen3 / 5395255
stomach2 / 9661920
testis16 / 33044248
thymus2 / 8113124
thyroid0 / 474730 
tonsil2 / 16999117
trachea0 / 524130 
umbilical cord0 / 136800 
uterus20 / 23287885
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 217118_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts155.6
Adipocyte81.5
AdrenalCortex37.3
Adrenalgland44.8
Amygdala220.8
Appendix25.8
AtrioventricularNode29.6
BDCA4+_DentriticCells618.7
Bonemarrow69.25
BronchialEpithelialCells102.65
CD105+_Endothelial114.4
CD14+_Monocytes1091.35
CD19+_BCells(neg._sel.)94
CD33+_Myeloid1356.45
CD34+322.5
CD4+_Tcells21.65
CD56+_NKCells189.55
CD71+_EarlyErythroid31.55
CD8+_Tcells24.55
CardiacMyocytes25.65
Caudatenucleus155.4
Cerebellum23.25
CerebellumPeduncles39.55
CiliaryGanglion42.25
CingulateCortex201.8
Colorectaladenocarcinoma32.5
DorsalRootGanglion40.45
FetalThyroid22.7
Fetalbrain108.55
Fetalliver12.85
Fetallung28.05
GlobusPallidus66.75
Heart40.65
Hypothalamus509.2
Kidney14.7
Leukemia_chronicMyelogenousK-56218.2
Leukemia_promyelocytic-HL-6022.75
Leukemialymphoblastic(MOLT-4)28.65
Liver46.3
Lung237.65
Lymphnode62.85
Lymphoma_burkitts(Daudi)38.75
Lymphoma_burkitts(Raji)27.2
MedullaOblongata237.35
OccipitalLobe137.5
OlfactoryBulb186.7
Ovary15.8
Pancreas15.25
PancreaticIslet26.4
ParietalLobe173.5
Pituitary19
Placenta29.2
Pons111.3
PrefrontalCortex1253.6
Prostate59.6
Salivarygland15.3
SkeletalMuscle21.2
Skin27.2
SmoothMuscle30.45
Spinalcord196.45
SubthalamicNucleus145.85
SuperiorCervicalGanglion28.4
TemporalLobe85.9
Testis77.05
TestisGermCell41.8
TestisIntersitial36.95
TestisLeydigCell26.4
TestisSeminiferousTubule34.5
Thalamus157.55
Thymus28.6
Thyroid31.4
Tongue34.3
Tonsil34.05
Trachea26.75
TrigeminalGanglion29.75
Uterus24.45
UterusCorpus24.25
WholeBlood143.35
Wholebrain210.25
colon14.8
pineal_day33.72
pineal_night28.34
retina90.6
small_intestine13.95
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P88479
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala12.02 ± 0.19
Basal Forebrain12.08 ± 0.41
Basal Part of Pons11.92 ± 0.35
Cerebellar Cortex11.63 ± 0.22
Cerebellar Nuclei12.12 ± 0.32
Claustrum12.04 ± 0.24
Epithalamus11.6 ± 0.61
Frontal Lobe12.01 ± 0.47
Globus Pallidus13.02 ± 0.2
Hypothalamus11.89 ± 0.19
Insula11.99 ± 0.28
Limbic Lobe12.09 ± 0.53
Mesencephalon12.17 ± 0.46
Myelencephalon12.11 ± 0.44
Occipital Lobe12.3 ± 0.38
Parietal Lobe12.14 ± 0.32
Pontine Tegmentum12.11 ± 0.38
Striatum12.55 ± 0.37
Subthalamus12.26 ± 0.39
Temporal Lobe12.02 ± 0.29
Thalamus12.07 ± 0.34
White Matter13.66 ± 0.36
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
5031439G07RikCBCerebellum25.57
20.22
5031439G07RikCTXCerebral cortex52.45
19.33
5031439G07RikHIPHippocampal region33.85
20.65
5031439G07RikHPFHippocampal formation45.1
22.2
5031439G07RikHYHypothalamus96.97
36.91
5031439G07RikLSXLateral septal complex68.81
19.45
5031439G07RikMBMidbrain79.41
37.45
5031439G07RikMYMedulla91.88
52.93
5031439G07RikOLFOlfactory bulb52.61
20.95
5031439G07RikPPons84.95
44.48
5031439G07RikPALPallidum75.48
32.1
5031439G07RikRHPRetrohippocampal region68.34
26.19
5031439G07RiksAMYStriatum-like amygdalar nuclei75.83
24.07
5031439G07RikSTRStriatum29.85
9.35
5031439G07RikSTRdStriatum dorsal region21.53
6.89
5031439G07RikSTRvStriatum ventral region26.29
8
5031439G07RikTHThalamus56.78
22.43
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00495615 24 266 289 VSTGDTSPCGTEEDSSPASPMHER Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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