AutismKB 2.0

Annotation Detail for DNAJC13


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Basic Information Top
Gene Symbol:DNAJC13 ( FLJ25863,KIAA0678,RME8 )
Gene Full Name: DnaJ (Hsp40) homolog, subfamily C, member 13
Band: 3q22.1
Quick LinksEntrez ID:23317; OMIM: NA; Uniprot ID:DJC13_HUMAN; ENSEMBL ID: ENSG00000138246; HGNC ID: 30343
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst1 / 6231916
fetus43 / 56401276
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult92 / 193912147
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma2 / 17475114
breast (mammary gland) tumor1 / 9417810
cervical tumor3 / 3436687
chondrosarcoma9 / 82823108
colorectal tumor4 / 11424635
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor17 / 26384564
glioma2 / 10688318
head and neck tumor11 / 13630280
kidney tumor2 / 6895929
leukemia2 / 9584220
liver tumor3 / 9635931
lung tumor0 / 1031270 
lymphoma2 / 7175527
non-neoplasia7 / 9725071
normal147 / 336030743
ovarian tumor4 / 7668252
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer3 / 10268029
retinoblastoma0 / 463560 
skin tumor11 / 12494988
soft tissue/muscle tissue tumor12 / 12519195
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites1 / 4001524
bladder3 / 29757100
blood1 / 1234788
bone4 / 7165555
bone marrow1 / 4880120
brain35 / 110098931
cervix3 / 4817162
connective tissue17 / 149255113
ear0 / 162120 
embryonic tissue6 / 21572227
esophagus0 / 202090 
eye6 / 21105428
heart6 / 8962666
intestine5 / 23447221
kidney6 / 21177728
larynx1 / 2414541
liver5 / 20774324
lung6 / 33697417
lymph1 / 4427022
lymph node8 / 9161087
mammary gland5 / 15327132
mouth10 / 67052149
muscle3 / 10771527
nerve0 / 157680 
ovary4 / 10205139
pancreas4 / 21481218
parathyroid3 / 20539146
pharynx2 / 4132848
pituitary gland2 / 16585120
placenta12 / 28082542
prostate8 / 18934542
salivary gland2 / 2015599
skin22 / 210574104
spleen0 / 539520 
stomach4 / 9661941
testis20 / 33044260
thymus2 / 8113124
thyroid2 / 4747342
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus10 / 23287842
vascular6 / 51780115
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212467_at
Cell line Expression level Expression bar
721_B_lymphoblasts84.05
Adipocyte31.25
AdrenalCortex29.7
Adrenalgland21.85
Amygdala24.25
Appendix24.2
AtrioventricularNode24.5
BDCA4+_DentriticCells84.95
Bonemarrow24.8
BronchialEpithelialCells20.8
CD105+_Endothelial25.7
CD14+_Monocytes57.1
CD19+_BCells(neg._sel.)43.6
CD33+_Myeloid165.65
CD34+28.5
CD4+_Tcells49.4
CD56+_NKCells79.55
CD71+_EarlyErythroid20.85
CD8+_Tcells59.1
CardiacMyocytes50.1
Caudatenucleus25.2
Cerebellum15.15
CerebellumPeduncles27
CiliaryGanglion18.65
CingulateCortex23.3
Colorectaladenocarcinoma25.7
DorsalRootGanglion26.9
FetalThyroid23.45
Fetalbrain26.1
Fetalliver24.25
Fetallung32.8
GlobusPallidus17.55
Heart37.05
Hypothalamus24.4
Kidney22.15
Leukemia_chronicMyelogenousK-56216.75
Leukemia_promyelocytic-HL-6026.05
Leukemialymphoblastic(MOLT-4)18.1
Liver33.85
Lung20.2
Lymphnode25.6
Lymphoma_burkitts(Daudi)37.65
Lymphoma_burkitts(Raji)35.15
MedullaOblongata18.9
OccipitalLobe25.2
OlfactoryBulb22.85
Ovary18.25
Pancreas18.4
PancreaticIslet23.8
ParietalLobe26.65
Pituitary24.45
Placenta17.7
Pons21.95
PrefrontalCortex40.15
Prostate25.4
Salivarygland19.7
SkeletalMuscle31.05
Skin19.45
SmoothMuscle32.8
Spinalcord28.05
SubthalamicNucleus17.65
SuperiorCervicalGanglion36.65
TemporalLobe19.15
Testis16.2
TestisGermCell31.45
TestisIntersitial15.7
TestisLeydigCell20.8
TestisSeminiferousTubule19.5
Thalamus23.5
Thymus13.65
Thyroid52.15
Tongue23.65
Tonsil24.1
Trachea22.75
TrigeminalGanglion36.9
Uterus41.8
UterusCorpus18.65
WholeBlood41.1
Wholebrain13.75
colon40.65
pineal_day31.72
pineal_night34.82
retina25.05
small_intestine32.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_5778_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.47 ± 0.42
Basal Forebrain4.58 ± 0.32
Basal Part of Pons4.29 ± 0.33
Cerebellar Cortex4.28 ± 0.3
Cerebellar Nuclei4.34 ± 0.6
Claustrum4.7 ± 0.41
Epithalamus4.41 ± 0.28
Frontal Lobe4.51 ± 0.39
Globus Pallidus5.11 ± 0.39
Hypothalamus4.54 ± 0.64
Insula4.37 ± 0.32
Limbic Lobe4.54 ± 0.39
Mesencephalon4.62 ± 0.43
Myelencephalon4.5 ± 0.47
Occipital Lobe4.53 ± 0.39
Parietal Lobe4.44 ± 0.36
Pontine Tegmentum4.54 ± 0.39
Striatum4.42 ± 0.42
Subthalamus4.65 ± 0.56
Temporal Lobe4.53 ± 0.39
Thalamus4.52 ± 0.39
White Matter4.99 ± 0.38
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Dnajc13CBCerebellum7.83
8.85
Dnajc13CTXCerebral cortex64.88
50.31
Dnajc13HIPHippocampal region34.75
45.64
Dnajc13HPFHippocampal formation40.93
44.19
Dnajc13HYHypothalamus15.11
11.56
Dnajc13LSXLateral septal complex10.72
7.45
Dnajc13MBMidbrain16.6
14.82
Dnajc13MYMedulla11.82
12.99
Dnajc13OLFOlfactory bulb44.07
36.58
Dnajc13PPons13.18
13.53
Dnajc13PALPallidum19.19
16.63
Dnajc13RHPRetrohippocampal region50.51
42.88
Dnajc13sAMYStriatum-like amygdalar nuclei13.34
9.23
Dnajc13STRStriatum19.2
13.51
Dnajc13STRdStriatum dorsal region21.23
15.33
Dnajc13STRvStriatum ventral region20.26
13.06
Dnajc13THThalamus26.85
22.18
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
DJC13_HUMAN_1033 16 1033 1048 AELLEFLESQQENMIK PRIDE
PAp00041118 19 1666 1684 KGDCDKTYGSEFVYSDHAK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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