Annotation Detail for TBC1D30
Basic Information Top
| Gene Symbol: | TBC1D30 ( KIAA0984 ) |
|---|---|
| Gene Full Name: | TBC1 domain family, member 30 |
| Band: | 12q14.3 |
| Quick Links | Entrez ID:23329; OMIM: NA; Uniprot ID:B9A6M9_HUMAN; ENSEMBL ID: ENSG00000111490; HGNC ID: 29164 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.192492
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 20 / 564012 | 35 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 16 / 1939121 | 8 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 |  |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 3 / 263845 | 11 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 69 / 3360307 | 20 | |
| ovarian tumor | 1 / 76682 | 13 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 36 / 1100989 | 32 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 2 / 211054 | 9 | |
| heart | 0 / 89626 | 0 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 2 / 211777 | 9 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 1 / 102051 | 9 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 2 / 330442 | 6 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 1 / 52413 | 19 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_32_P206050
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.25 ± 0.46 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.52 ± 0.34 | |
| Basal Part of Pons | 5.82 ± 0.53 | |
| Cerebellar Cortex | 4.89 ± 0.62 | |
| Cerebellar Nuclei | 4.89 ± 0.59 | |
| Claustrum | 4.88 ± 0.78 | |
| Epithalamus | 3.92 ± 1.18 | |
| Frontal Lobe | 4.94 ± 0.7 | |
| Globus Pallidus | 3.91 ± 0.56 | |
| Hypothalamus | 4.49 ± 0.79 | |
| Insula | 4.96 ± 0.3 | |
| Limbic Lobe | 5.42 ± 0.55 | |
| Mesencephalon | 4.88 ± 0.67 | |
| Myelencephalon | 4.98 ± 0.73 | |
| Occipital Lobe | 5.57 ± 0.56 | |
| Parietal Lobe | 5.19 ± 0.62 | |
| Pontine Tegmentum | 4.89 ± 0.5 | |
| Striatum | 5.23 ± 0.55 | |
| Subthalamus | 5.55 ± 0.11 | |
| Temporal Lobe | 4.88 ± 0.59 | |
| Thalamus | 4.95 ± 0.51 | |
| White Matter | 2.89 ± 0.42 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| 4930505D03Rik | CB | Cerebellum | 1.65 | |
| 2.2 | | |||
| 4930505D03Rik | CTX | Cerebral cortex | 17.68 | |
| 15.03 | | |||
| 4930505D03Rik | HIP | Hippocampal region | 2.59 | |
| 3.34 | | |||
| 4930505D03Rik | HPF | Hippocampal formation | 3.47 | |
| 3.71 | | |||
| 4930505D03Rik | HY | Hypothalamus | 0.11 | |
| 0.26 | | |||
| 4930505D03Rik | LSX | Lateral septal complex | 0.98 | |
| 1.25 | | |||
| 4930505D03Rik | MB | Midbrain | 0.7 | |
| 0.99 | | |||
| 4930505D03Rik | MY | Medulla | 2.17 | |
| 2.7 | | |||
| 4930505D03Rik | OLF | Olfactory bulb | 6.37 | |
| 7.27 | | |||
| 4930505D03Rik | P | Pons | 1.24 | |
| 1.75 | | |||
| 4930505D03Rik | PAL | Pallidum | 0.55 | |
| 0.48 | | |||
| 4930505D03Rik | RHP | Retrohippocampal region | 5.37 | |
| 4.59 | | |||
| 4930505D03Rik | sAMY | Striatum-like amygdalar nuclei | 0.72 | |
| 0.7 | | |||
| 4930505D03Rik | STR | Striatum | 2.89 | |
| 2.55 | | |||
| 4930505D03Rik | STRd | Striatum dorsal region | 1.63 | |
| 1.29 | | |||
| 4930505D03Rik | STRv | Striatum ventral region | 11.29 | |
| 9.64 | | |||
| 4930505D03Rik | TH | Thalamus | 0.78 | |
| 0.95 | |