AutismKB 2.0

Annotation Detail for DNAJC16


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Basic Information Top
Gene Symbol:DNAJC16 ( DKFZp686G1298,DKFZp686N0387,DKFZp781I1547,KIAA0962 )
Gene Full Name: DnaJ (Hsp40) homolog, subfamily C, member 16
Band: 1p36.21
Quick LinksEntrez ID:23341; OMIM: NA; Uniprot ID:DJC16_HUMAN; ENSEMBL ID: ENSG00000116138; HGNC ID: 29157
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst1 / 6231916
fetus7 / 56401212
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult49 / 193912125
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor7 / 11424661
esophageal tumor0 / 172900 
gastrointestinal tumor2 / 11936916
germ cell tumor5 / 26384518
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia3 / 9584231
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma2 / 7175527
non-neoplasia1 / 9725010
normal95 / 336030728
ovarian tumor2 / 7668226
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder0 / 297570 
blood2 / 12347816
bone0 / 716550 
bone marrow3 / 4880161
brain17 / 110098915
cervix0 / 481710 
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue3 / 21572213
esophagus0 / 202090 
eye10 / 21105447
heart1 / 8962611
intestine11 / 23447246
kidney7 / 21177733
larynx0 / 241450 
liver2 / 2077439
lung12 / 33697435
lymph0 / 442700 
lymph node14 / 91610152
mammary gland0 / 1532710 
mouth1 / 6705214
muscle4 / 10771537
nerve1 / 1576863
ovary3 / 10205129
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx2 / 4132848
pituitary gland0 / 165850 
placenta8 / 28082528
prostate3 / 18934515
salivary gland0 / 201550 
skin1 / 2105744
spleen1 / 5395218
stomach0 / 966190 
testis11 / 33044233
thymus1 / 8113112
thyroid2 / 4747342
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus2 / 2328788
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212908_at
Cell line Expression level Expression bar
721_B_lymphoblasts13.4
Adipocyte4.4
AdrenalCortex5.05
Adrenalgland7
Amygdala4.45
Appendix4.05
AtrioventricularNode3.1
BDCA4+_DentriticCells14.5
Bonemarrow4.25
BronchialEpithelialCells4.8
CD105+_Endothelial4.8
CD14+_Monocytes5.55
CD19+_BCells(neg._sel.)30.65
CD33+_Myeloid8.8
CD34+22.1
CD4+_Tcells15.6
CD56+_NKCells18.55
CD71+_EarlyErythroid4.45
CD8+_Tcells23.25
CardiacMyocytes5.25
Caudatenucleus3.95
Cerebellum4
CerebellumPeduncles5
CiliaryGanglion3
CingulateCortex5.25
Colorectaladenocarcinoma3.9
DorsalRootGanglion3.25
FetalThyroid4.3
Fetalbrain4
Fetalliver4.35
Fetallung5.25
GlobusPallidus3.15
Heart5.15
Hypothalamus5.3
Kidney7.65
Leukemia_chronicMyelogenousK-56210.05
Leukemia_promyelocytic-HL-603.9
Leukemialymphoblastic(MOLT-4)3.6
Liver5.3
Lung6.35
Lymphnode3.9
Lymphoma_burkitts(Daudi)5.5
Lymphoma_burkitts(Raji)6.35
MedullaOblongata5.1
OccipitalLobe6
OlfactoryBulb4.05
Ovary8.6
Pancreas3.15
PancreaticIslet4.95
ParietalLobe4.6
Pituitary6.25
Placenta24.15
Pons4
PrefrontalCortex11.6
Prostate5.4
Salivarygland3.4
SkeletalMuscle4.2
Skin3.2
SmoothMuscle5.1
Spinalcord4.7
SubthalamicNucleus3.85
SuperiorCervicalGanglion4.5
TemporalLobe3.75
Testis8.9
TestisGermCell3.75
TestisIntersitial3.85
TestisLeydigCell4.05
TestisSeminiferousTubule3.75
Thalamus4.5
Thymus8.3
Thyroid7.2
Tongue3.95
Tonsil4.35
Trachea4.6
TrigeminalGanglion4.1
Uterus7.4
UterusCorpus3.8
WholeBlood4.55
Wholebrain9.45
colon4.5
pineal_day17.54
pineal_night17.34
retina7.675
small_intestine4.75
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P358009
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.3 ± 0.38
Basal Forebrain6.62 ± 0.2
Basal Part of Pons6.88 ± 0.22
Cerebellar Cortex6.75 ± 0.36
Cerebellar Nuclei6.72 ± 0.35
Claustrum6.33 ± 0.48
Epithalamus6.91 ± 0.14
Frontal Lobe6.77 ± 0.31
Globus Pallidus6.05 ± 0.27
Hypothalamus6.64 ± 0.36
Insula6.7 ± 0.23
Limbic Lobe6.58 ± 0.45
Mesencephalon6.55 ± 0.44
Myelencephalon6.58 ± 0.39
Occipital Lobe6.48 ± 0.41
Parietal Lobe6.71 ± 0.34
Pontine Tegmentum6.56 ± 0.41
Striatum6.36 ± 0.38
Subthalamus6.84 ± 0.27
Temporal Lobe6.63 ± 0.32
Thalamus6.65 ± 0.28
White Matter6.44 ± 0.27
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Dnajc16CBCerebellum2.92
3.46
Dnajc16CTXCerebral cortex0.53
0.51
Dnajc16HIPHippocampal region7.99
4.01
Dnajc16HPFHippocampal formation6.08
3.02
Dnajc16HYHypothalamus0.16
0.18
Dnajc16LSXLateral septal complex0.15
0.15
Dnajc16MBMidbrain0.18
0.18
Dnajc16MYMedulla0.35
0.33
Dnajc16OLFOlfactory bulb2.76
2.19
Dnajc16PPons0.25
0.23
Dnajc16PALPallidum0.24
0.23
Dnajc16RHPRetrohippocampal region2.4
1.47
Dnajc16sAMYStriatum-like amygdalar nuclei0.24
0.2
Dnajc16STRStriatum0.19
0.14
Dnajc16STRdStriatum dorsal region0.14
0.11
Dnajc16STRvStriatum ventral region0.35
0.23
Dnajc16THThalamus0.26
0.19
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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