AutismKB 2.0

Annotation Detail for GRIP1


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Basic Information Top
Gene Symbol:GRIP1 ( GRIP )
Gene Full Name: glutamate receptor interacting protein 1
Band: 12q14.3
Quick LinksEntrez ID:23426; OMIM: 604597; Uniprot ID:GRIP1_HUMAN; ENSEMBL ID: ENSG00000155974; HGNC ID: 18708
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body5 / 7076170
blastocyst1 / 6231916
fetus32 / 56401256
neonate0 / 310970 
infant2 / 2362084
juvenile0 / 555560 
adult37 / 193912119
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor13 / 26384549
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal84 / 336030724
ovarian tumor2 / 7668226
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS2 / 12568015
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone0 / 716550 
bone marrow0 / 488010 
brain35 / 110098931
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue8 / 21572237
esophagus0 / 202090 
eye3 / 21105414
heart2 / 8962622
intestine0 / 2344720 
kidney5 / 21177723
larynx0 / 241450 
liver0 / 2077430 
lung0 / 3369740 
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary2 / 10205119
pancreas0 / 2148120 
parathyroid6 / 20539292
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta17 / 28082560
prostate0 / 1893450 
salivary gland1 / 2015549
skin1 / 2105744
spleen0 / 539520 
stomach0 / 966190 
testis5 / 33044215
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 214018_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.2
Adipocyte4.25
AdrenalCortex4.45
Adrenalgland3.7
Amygdala4.4
Appendix4.4
AtrioventricularNode3.5
BDCA4+_DentriticCells4.65
Bonemarrow4.2
BronchialEpithelialCells4.15
CD105+_Endothelial4.35
CD14+_Monocytes4.55
CD19+_BCells(neg._sel.)4.6
CD33+_Myeloid5.45
CD34+5.4
CD4+_Tcells4.6
CD56+_NKCells5.1
CD71+_EarlyErythroid4.05
CD8+_Tcells4.1
CardiacMyocytes5.6
Caudatenucleus3.85
Cerebellum3.45
CerebellumPeduncles4.9
CiliaryGanglion3.15
CingulateCortex4.4
Colorectaladenocarcinoma4.3
DorsalRootGanglion3.4
FetalThyroid4.2
Fetalbrain4.3
Fetalliver3.7
Fetallung3.45
GlobusPallidus3.2
Heart5.55
Hypothalamus4.65
Kidney3.45
Leukemia_chronicMyelogenousK-5623.9
Leukemia_promyelocytic-HL-603.8
Leukemialymphoblastic(MOLT-4)3.45
Liver5.75
Lung4.7
Lymphnode3.65
Lymphoma_burkitts(Daudi)5.5
Lymphoma_burkitts(Raji)6
MedullaOblongata3.9
OccipitalLobe3.85
OlfactoryBulb3.35
Ovary2.95
Pancreas3.45
PancreaticIslet4.6
ParietalLobe4.6
Pituitary5
Placenta4.45
Pons4.1
PrefrontalCortex5.25
Prostate4.95
Salivarygland3.45
SkeletalMuscle5.15
Skin3.4
SmoothMuscle4.85
Spinalcord4.55
SubthalamicNucleus3.95
SuperiorCervicalGanglion5.05
TemporalLobe3.95
Testis3.7
TestisGermCell3.55
TestisIntersitial3.6
TestisLeydigCell4.25
TestisSeminiferousTubule3.7
Thalamus4.4
Thymus3.3
Thyroid5.3
Tongue4.3
Tonsil4.15
Trachea3.6
TrigeminalGanglion4.45
Uterus3.45
UterusCorpus3.9
WholeBlood4.65
Wholebrain3.6
colon4.3
pineal_day5.32
pineal_night5.22
retina5.175
small_intestine4.1
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P113382
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.73 ± 0.85
Basal Forebrain3.76 ± 0.4
Basal Part of Pons2.94 ± 0.53
Cerebellar Cortex2.7 ± 0.39
Cerebellar Nuclei3.38 ± 0.53
Claustrum4.43 ± 0.68
Epithalamus3.13 ± 0.95
Frontal Lobe3.31 ± 0.69
Globus Pallidus2.96 ± 0.81
Hypothalamus3.44 ± 0.55
Insula3.48 ± 0.56
Limbic Lobe3.43 ± 0.62
Mesencephalon3.44 ± 0.76
Myelencephalon3.34 ± 0.7
Occipital Lobe3.56 ± 0.66
Parietal Lobe3.51 ± 0.66
Pontine Tegmentum3.38 ± 0.66
Striatum3.6 ± 0.86
Subthalamus4.02 ± 0.45
Temporal Lobe3.28 ± 0.64
Thalamus3.05 ± 0.71
White Matter2.5 ± 0.19
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Grip1CBCerebellum22.27
30
Grip1CTXCerebral cortex43.2
33.14
Grip1HIPHippocampal region40.53
46.8
Grip1HPFHippocampal formation46.2
45.89
Grip1HYHypothalamus17.29
13.4
Grip1LSXLateral septal complex64.85
47.5
Grip1MBMidbrain19.7
17.68
Grip1MYMedulla15.83
16.48
Grip1OLFOlfactory bulb58.5
52.34
Grip1PPons13.56
13.43
Grip1PALPallidum27.11
23.35
Grip1RHPRetrohippocampal region56.52
45.71
Grip1sAMYStriatum-like amygdalar nuclei30.67
21.48
Grip1STRStriatum31.89
25.14
Grip1STRdStriatum dorsal region28.82
24.26
Grip1STRvStriatum ventral region29.08
20.16
Grip1THThalamus24.07
22.37
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp01429318 26 627 652 YGGPLGITISGTEEPFDPIIISSLTK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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