AutismKB 2.0

Annotation Detail for LILRA4


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:LILRA4 ( CD85g,ILT7,MGC129597,MGC129598 )
Gene Full Name: leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4
Band: 19q13.42
Quick LinksEntrez ID:23547; OMIM: 607517; Uniprot ID:LIRA4_HUMAN; ENSEMBL ID: ENSG00000187095; HGNC ID: 15503
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus0 / 5640120 
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult7 / 19391213
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor0 / 1193690 
germ cell tumor0 / 2638450 
glioma3 / 10688328
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia3 / 9725030
normal10 / 33603072
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor1 / 1249498
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow1 / 4880120
brain5 / 11009894
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine1 / 2344724
kidney1 / 2117774
larynx0 / 241450 
liver0 / 2077430 
lung1 / 3369742
lymph0 / 442700 
lymph node2 / 9161021
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary0 / 1020510 
pancreas0 / 2148120 
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland0 / 201550 
skin1 / 2105744
spleen4 / 5395274
stomach0 / 966190 
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus0 / 2328780 
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 210313_at
Cell line Expression level Expression bar
721_B_lymphoblasts140.4
Adipocyte81.85
AdrenalCortex188.5
Adrenalgland102.55
Amygdala111.8
Appendix119.55
AtrioventricularNode233.3
BDCA4+_DentriticCells4314.3
Bonemarrow154.35
BronchialEpithelialCells76.55
CD105+_Endothelial79.55
CD14+_Monocytes270.05
CD19+_BCells(neg._sel.)214.55
CD33+_Myeloid107
CD34+195.5
CD4+_Tcells127.8
CD56+_NKCells137.55
CD71+_EarlyErythroid118.55
CD8+_Tcells70.65
CardiacMyocytes183.7
Caudatenucleus136.25
Cerebellum94.1
CerebellumPeduncles132.2
CiliaryGanglion164.25
CingulateCortex156.9
Colorectaladenocarcinoma253.15
DorsalRootGanglion281.55
FetalThyroid77.8
Fetalbrain100.85
Fetalliver153.85
Fetallung62.85
GlobusPallidus129.85
Heart260.25
Hypothalamus90.65
Kidney138.2
Leukemia_chronicMyelogenousK-56283.25
Leukemia_promyelocytic-HL-6078.15
Leukemialymphoblastic(MOLT-4)70.9
Liver170.7
Lung72.8
Lymphnode77.6
Lymphoma_burkitts(Daudi)144.05
Lymphoma_burkitts(Raji)496.55
MedullaOblongata123.5
OccipitalLobe77.2
OlfactoryBulb78.85
Ovary139.7
Pancreas76.6
PancreaticIslet115.4
ParietalLobe101.1
Pituitary115.6
Placenta86.45
Pons170.85
PrefrontalCortex99.75
Prostate99.1
Salivarygland196.4
SkeletalMuscle249.1
Skin205.45
SmoothMuscle70.4
Spinalcord97.9
SubthalamicNucleus161.65
SuperiorCervicalGanglion262.8
TemporalLobe105.65
Testis113.15
TestisGermCell90
TestisIntersitial72.3
TestisLeydigCell189.35
TestisSeminiferousTubule163.8
Thalamus204.3
Thymus49.1
Thyroid86.85
Tongue159.65
Tonsil158.1
Trachea99.25
TrigeminalGanglion151.7
Uterus74.8
UterusCorpus147
WholeBlood77.5
Wholebrain57.8
colon115.25
pineal_day176.06
pineal_night169.42
retina138.575
small_intestine85.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_4735_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.42 ± 0.96
Basal Forebrain1.86 ± 0.62
Basal Part of Pons1.53 ± 0.7
Cerebellar Cortex1.8 ± 0.71
Cerebellar Nuclei2.11 ± 0.67
Claustrum2.78 ± 0.92
Epithalamus1.57 ± 0.73
Frontal Lobe1.77 ± 0.74
Globus Pallidus2.37 ± 0.57
Hypothalamus1.8 ± 0.62
Insula1.44 ± 0.53
Limbic Lobe1.92 ± 0.71
Mesencephalon2.12 ± 0.72
Myelencephalon1.92 ± 0.73
Occipital Lobe2.18 ± 0.91
Parietal Lobe1.91 ± 0.76
Pontine Tegmentum1.83 ± 0.72
Striatum2.1 ± 0.67
Subthalamus2.12 ± 0.67
Temporal Lobe1.78 ± 0.78
Thalamus1.84 ± 0.64
White Matter2.2 ± 0.49
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
LIRA4_HUMAN_0 1 0 0 M@TPILTVLIC*LGLSLGPRTR PRIDE
PAp00039206 19 376 394 YQAEFPMSPVTSAHAGTYR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved