AutismKB 2.0

Annotation Detail for ZKSCAN5


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Basic Information Top
Gene Symbol:ZKSCAN5 ( FLJ39233,KIAA1015,MGC33710,ZFP95,ZNF914 )
Gene Full Name: zinc finger with KRAB and SCAN domains 5
Band: 7q22.1
Quick LinksEntrez ID:23660; OMIM: 611272; Uniprot ID:ZKSC5_HUMAN; ENSEMBL ID: ENSG00000196652; HGNC ID: 12867
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst4 / 6231964
fetus19 / 56401233
neonate2 / 3109764
infant0 / 236200 
juvenile1 / 5555617
adult63 / 193912132
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor1 / 3436629
chondrosarcoma4 / 8282348
colorectal tumor4 / 11424635
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor12 / 26384545
glioma1 / 1068839
head and neck tumor4 / 13630229
kidney tumor3 / 6895943
leukemia1 / 9584210
liver tumor5 / 9635951
lung tumor3 / 10312729
lymphoma0 / 717550 
non-neoplasia1 / 9725010
normal79 / 336030723
ovarian tumor0 / 766820 
pancreatic tumor2 / 10461619
primitive neuroectodermal tumor of the CNS3 / 12568023
prostate cancer1 / 1026809
retinoblastoma1 / 4635621
skin tumor3 / 12494924
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood2 / 12347816
bone2 / 7165527
bone marrow0 / 488010 
brain20 / 110098918
cervix1 / 4817120
connective tissue3 / 14925520
ear0 / 162120 
embryonic tissue5 / 21572223
esophagus0 / 202090 
eye5 / 21105423
heart1 / 8962611
intestine7 / 23447229
kidney8 / 21177737
larynx0 / 241450 
liver5 / 20774324
lung13 / 33697438
lymph0 / 442700 
lymph node2 / 9161021
mammary gland5 / 15327132
mouth3 / 6705244
muscle10 / 10771592
nerve0 / 157680 
ovary2 / 10205119
pancreas2 / 2148129
parathyroid1 / 2053948
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta3 / 28082510
prostate5 / 18934526
salivary gland0 / 201550 
skin6 / 21057428
spleen1 / 5395218
stomach2 / 9661920
testis17 / 33044251
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord2 / 13680146
uterus10 / 23287842
vascular1 / 5178019
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203731_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.5
Adipocyte4.15
AdrenalCortex4.4
Adrenalgland3.5
Amygdala4.4
Appendix4.2
AtrioventricularNode3.2
BDCA4+_DentriticCells4.65
Bonemarrow4.1
BronchialEpithelialCells4.1
CD105+_Endothelial6.5
CD14+_Monocytes6.9
CD19+_BCells(neg._sel.)4.6
CD33+_Myeloid7.9
CD34+8.5
CD4+_Tcells4.75
CD56+_NKCells6.5
CD71+_EarlyErythroid4.9
CD8+_Tcells4.4
CardiacMyocytes8.6
Caudatenucleus3.7
Cerebellum3.4
CerebellumPeduncles4.75
CiliaryGanglion2.95
CingulateCortex4.2
Colorectaladenocarcinoma6.9
DorsalRootGanglion3.15
FetalThyroid4.05
Fetalbrain4.15
Fetalliver3.6
Fetallung3.45
GlobusPallidus3.05
Heart5.45
Hypothalamus4.5
Kidney3.35
Leukemia_chronicMyelogenousK-5623.85
Leukemia_promyelocytic-HL-603.7
Leukemialymphoblastic(MOLT-4)3.55
Liver5.45
Lung4.65
Lymphnode3.6
Lymphoma_burkitts(Daudi)5.35
Lymphoma_burkitts(Raji)9.75
MedullaOblongata3.8
OccipitalLobe3.85
OlfactoryBulb3.3
Ovary2.8
Pancreas3.4
PancreaticIslet4.45
ParietalLobe4.4
Pituitary4.85
Placenta4.3
Pons3.9
PrefrontalCortex5.2
Prostate5.35
Salivarygland3.3
SkeletalMuscle4.75
Skin3.2
SmoothMuscle5.4
Spinalcord4.45
SubthalamicNucleus3.8
SuperiorCervicalGanglion4.65
TemporalLobe3.75
Testis3.6
TestisGermCell3.65
TestisIntersitial3.45
TestisLeydigCell4.1
TestisSeminiferousTubule3.55
Thalamus4.3
Thymus4.15
Thyroid6.05
Tongue4.25
Tonsil4.05
Trachea3.5
TrigeminalGanglion4.35
Uterus3.55
UterusCorpus3.7
WholeBlood4.6
Wholebrain3.6
colon4.2
pineal_day5.3
pineal_night5.16
retina5.05
small_intestine4.15
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_24_P317637
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.81 ± 0.39
Basal Forebrain5.96 ± 0.19
Basal Part of Pons5.79 ± 0.28
Cerebellar Cortex5.86 ± 0.25
Cerebellar Nuclei5.72 ± 0.34
Claustrum5.83 ± 0.51
Epithalamus5.76 ± 0.16
Frontal Lobe5.74 ± 0.33
Globus Pallidus5.87 ± 0.25
Hypothalamus5.68 ± 0.33
Insula5.65 ± 0.2
Limbic Lobe5.77 ± 0.26
Mesencephalon5.8 ± 0.38
Myelencephalon5.74 ± 0.34
Occipital Lobe5.88 ± 0.28
Parietal Lobe5.88 ± 0.28
Pontine Tegmentum5.8 ± 0.34
Striatum5.71 ± 0.25
Subthalamus5.98 ± 0.48
Temporal Lobe5.74 ± 0.28
Thalamus5.78 ± 0.25
White Matter5.68 ± 0.24
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Zfp95CBCerebellum4.2
4.52
Zfp95CTXCerebral cortex4.42
3.22
Zfp95HIPHippocampal region1.43
1.12
Zfp95HPFHippocampal formation1.68
1.27
Zfp95HYHypothalamus6.72
6.16
Zfp95LSXLateral septal complex14.31
9.24
Zfp95MBMidbrain1.64
1.56
Zfp95MYMedulla5.06
4.97
Zfp95OLFOlfactory bulb18.38
15.98
Zfp95PPons1.43
1.39
Zfp95PALPallidum9.26
7.14
Zfp95RHPRetrohippocampal region2.3
1.59
Zfp95sAMYStriatum-like amygdalar nuclei0.26
0.23
Zfp95STRStriatum5.45
3.79
Zfp95STRdStriatum dorsal region1.58
1.27
Zfp95STRvStriatum ventral region20.45
12.84
Zfp95THThalamus4.56
4.58
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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