AutismKB 2.0

Annotation Detail for GSPT2


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Basic Information Top
Gene Symbol:GSPT2 ( ERF3B,FLJ10441,GST2 )
Gene Full Name: G1 to S phase transition 2
Band: Xp11.22
Quick LinksEntrez ID:23708; OMIM: 300418; Uniprot ID:ERF3B_HUMAN; ENSEMBL ID: ENSG00000189369; HGNC ID: 4622
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body2 / 7076128
blastocyst1 / 6231916
fetus33 / 56401258
neonate0 / 310970 
infant1 / 2362042
juvenile3 / 5555653
adult39 / 193912120
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor0 / 343660 
chondrosarcoma2 / 8282324
colorectal tumor0 / 1142460 
esophageal tumor1 / 1729057
gastrointestinal tumor2 / 11936916
germ cell tumor21 / 26384579
glioma4 / 10688337
head and neck tumor0 / 1363020 
kidney tumor2 / 6895929
leukemia1 / 9584210
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia1 / 9725010
normal105 / 336030731
ovarian tumor0 / 766820 
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS6 / 12568047
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor2 / 12494916
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor0 / 902570 
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder0 / 297570 
blood1 / 1234788
bone1 / 7165513
bone marrow0 / 488010 
brain45 / 110098940
cervix1 / 4817120
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue11 / 21572250
esophagus1 / 2020949
eye1 / 2110544
heart7 / 8962678
intestine2 / 2344728
kidney7 / 21177733
larynx0 / 241450 
liver5 / 20774324
lung5 / 33697414
lymph0 / 442700 
lymph node2 / 9161021
mammary gland1 / 1532716
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas3 / 21481213
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta2 / 2808257
prostate3 / 18934515
salivary gland0 / 201550 
skin3 / 21057414
spleen3 / 5395255
stomach1 / 9661910
testis26 / 33044278
thymus4 / 8113149
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus3 / 23287812
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205541_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.25
Adipocyte7.55
AdrenalCortex7.55
Adrenalgland7.7
Amygdala30.25
Appendix7.85
AtrioventricularNode6.05
BDCA4+_DentriticCells50.6
Bonemarrow7.05
BronchialEpithelialCells7.05
CD105+_Endothelial7.2
CD14+_Monocytes7.2
CD19+_BCells(neg._sel.)42.3
CD33+_Myeloid8.05
CD34+28.7
CD4+_Tcells9.45
CD56+_NKCells60.55
CD71+_EarlyErythroid6.5
CD8+_Tcells7.1
CardiacMyocytes10
Caudatenucleus9.3
Cerebellum8.05
CerebellumPeduncles8.3
CiliaryGanglion5.7
CingulateCortex8.55
Colorectaladenocarcinoma6.3
DorsalRootGanglion5.7
FetalThyroid6.95
Fetalbrain25.65
Fetalliver6.7
Fetallung5.85
GlobusPallidus6.4
Heart9.9
Hypothalamus14.45
Kidney6.15
Leukemia_chronicMyelogenousK-5626.45
Leukemia_promyelocytic-HL-607
Leukemialymphoblastic(MOLT-4)4.6
Liver9.6
Lung7.65
Lymphnode6.2
Lymphoma_burkitts(Daudi)17
Lymphoma_burkitts(Raji)10.1
MedullaOblongata12.5
OccipitalLobe7.85
OlfactoryBulb5.65
Ovary5.2
Pancreas5.55
PancreaticIslet7.65
ParietalLobe8.3
Pituitary14.15
Placenta6.95
Pons6.9
PrefrontalCortex18.6
Prostate11.95
Salivarygland5.95
SkeletalMuscle9.55
Skin5.7
SmoothMuscle9.1
Spinalcord7.75
SubthalamicNucleus6.6
SuperiorCervicalGanglion8.2
TemporalLobe7.1
Testis13.85
TestisGermCell36.45
TestisIntersitial22.5
TestisLeydigCell8
TestisSeminiferousTubule6.8
Thalamus7.35
Thymus6.2
Thyroid16.9
Tongue7
Tonsil6.95
Trachea6
TrigeminalGanglion7.65
Uterus7.6
UterusCorpus6.65
WholeBlood7.9
Wholebrain30.25
colon16
pineal_day14.3
pineal_night14
retina9.575
small_intestine10.8
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_15951_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala8.21 ± 0.28
Basal Forebrain7.9 ± 0.21
Basal Part of Pons7.67 ± 0.27
Cerebellar Cortex7.8 ± 0.23
Cerebellar Nuclei7.35 ± 0.35
Claustrum8.03 ± 0.29
Epithalamus7.71 ± 0.2
Frontal Lobe7.89 ± 0.36
Globus Pallidus7.52 ± 0.23
Hypothalamus8.25 ± 0.25
Insula8.03 ± 0.35
Limbic Lobe8.2 ± 0.29
Mesencephalon7.92 ± 0.34
Myelencephalon7.87 ± 0.33
Occipital Lobe7.83 ± 0.33
Parietal Lobe7.88 ± 0.25
Pontine Tegmentum7.92 ± 0.32
Striatum7.92 ± 0.41
Subthalamus7.85 ± 0.42
Temporal Lobe7.97 ± 0.28
Thalamus7.64 ± 0.23
White Matter7.2 ± 0.26
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Gspt2CBCerebellum10.11
10.17
Gspt2CTXCerebral cortex25.51
18.05
Gspt2HIPHippocampal region20.65
20.26
Gspt2HPFHippocampal formation20.28
18.04
Gspt2HYHypothalamus10.51
7.66
Gspt2LSXLateral septal complex12.55
8.66
Gspt2MBMidbrain10.23
8.41
Gspt2MYMedulla15.69
15.78
Gspt2OLFOlfactory bulb22.81
17.29
Gspt2PPons10.21
10.05
Gspt2PALPallidum10.04
8.37
Gspt2RHPRetrohippocampal region19.25
14.63
Gspt2sAMYStriatum-like amygdalar nuclei15.78
11.41
Gspt2STRStriatum7.74
5.33
Gspt2STRdStriatum dorsal region5.54
3.88
Gspt2STRvStriatum ventral region10.16
6.29
Gspt2THThalamus9.12
6.5
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00002613 11 575 585 FVKQDQVCIAR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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