AutismKB 2.0

Annotation Detail for FTSJ1


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Basic Information Top
Gene Symbol:FTSJ1 ( CDLIV,MRX44,MRX9,SPB1,TRM7 )
Gene Full Name: FtsJ homolog 1 (E. coli)
Band: Xp11.23
Quick LinksEntrez ID:24140; OMIM: 300499; Uniprot ID:RRMJ1_HUMAN; ENSEMBL ID: ENSG00000068438; HGNC ID: 13254
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst7 / 62319112
fetus29 / 56401251
neonate3 / 3109796
infant9 / 23620381
juvenile11 / 55556197
adult132 / 193912168
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor6 / 9417863
cervical tumor11 / 34366320
chondrosarcoma8 / 8282396
colorectal tumor5 / 11424643
esophageal tumor6 / 17290347
gastrointestinal tumor12 / 119369100
germ cell tumor41 / 263845155
glioma16 / 106883149
head and neck tumor2 / 13630214
kidney tumor4 / 6895958
leukemia22 / 95842229
liver tumor8 / 9635983
lung tumor10 / 10312796
lymphoma7 / 7175597
non-neoplasia9 / 9725092
normal214 / 336030763
ovarian tumor7 / 7668291
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS23 / 125680183
prostate cancer9 / 10268087
retinoblastoma3 / 4635664
skin tumor9 / 12494972
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor12 / 90257132
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites2 / 4001549
bladder3 / 29757100
blood23 / 123478186
bone12 / 71655167
bone marrow4 / 4880181
brain99 / 110098989
cervix11 / 48171228
connective tissue10 / 14925566
ear0 / 162120 
embryonic tissue10 / 21572246
esophagus6 / 20209296
eye6 / 21105428
heart9 / 89626100
intestine11 / 23447246
kidney26 / 211777122
larynx0 / 241450 
liver14 / 20774367
lung23 / 33697468
lymph7 / 44270158
lymph node2 / 9161021
mammary gland8 / 15327152
mouth0 / 670520 
muscle4 / 10771537
nerve0 / 157680 
ovary10 / 10205197
pancreas8 / 21481237
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta12 / 28082542
prostate19 / 189345100
salivary gland2 / 2015599
skin16 / 21057475
spleen9 / 53952166
stomach19 / 96619196
testis23 / 33044269
thymus7 / 8113186
thyroid1 / 4747321
tonsil1 / 1699958
trachea2 / 5241338
umbilical cord1 / 1368073
uterus20 / 23287885
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213937_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts45.95
Adipocyte34.2
AdrenalCortex21.85
Adrenalgland22.85
Amygdala15.05
Appendix21.35
AtrioventricularNode13.45
BDCA4+_DentriticCells29.9
Bonemarrow25.5
BronchialEpithelialCells77.25
CD105+_Endothelial18.25
CD14+_Monocytes23.05
CD19+_BCells(neg._sel.)23.25
CD33+_Myeloid26.15
CD34+26.9
CD4+_Tcells26.45
CD56+_NKCells52.9
CD71+_EarlyErythroid20.4
CD8+_Tcells36.45
CardiacMyocytes40
Caudatenucleus28
Cerebellum18.05
CerebellumPeduncles31.15
CiliaryGanglion19.75
CingulateCortex22.4
Colorectaladenocarcinoma55.85
DorsalRootGanglion18.75
FetalThyroid22.05
Fetalbrain21.25
Fetalliver19.5
Fetallung19.3
GlobusPallidus22.7
Heart27
Hypothalamus24.5
Kidney18.95
Leukemia_chronicMyelogenousK-56232.8
Leukemia_promyelocytic-HL-6038.55
Leukemialymphoblastic(MOLT-4)51.15
Liver29.4
Lung23.9
Lymphnode20.9
Lymphoma_burkitts(Daudi)33.4
Lymphoma_burkitts(Raji)44.25
MedullaOblongata19.65
OccipitalLobe19.25
OlfactoryBulb16.95
Ovary16.35
Pancreas16.65
PancreaticIslet21.9
ParietalLobe23.15
Pituitary41.75
Placenta22.5
Pons21.3
PrefrontalCortex26.15
Prostate24.45
Salivarygland14.55
SkeletalMuscle29.25
Skin17.2
SmoothMuscle46.3
Spinalcord22.75
SubthalamicNucleus20.5
SuperiorCervicalGanglion34.45
TemporalLobe23.75
Testis27.6
TestisGermCell18.05
TestisIntersitial18.3
TestisLeydigCell22.25
TestisSeminiferousTubule19.45
Thalamus21.85
Thymus19.75
Thyroid24.75
Tongue22.15
Tonsil20.15
Trachea19.35
TrigeminalGanglion20.5
Uterus18.15
UterusCorpus17.15
WholeBlood24.95
Wholebrain17.8
colon17.15
pineal_day21.42
pineal_night20.6
retina20.2
small_intestine12.85
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P22473
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.86 ± 0.64
Basal Forebrain3.79 ± 0.63
Basal Part of Pons4.31 ± 0.37
Cerebellar Cortex4.32 ± 0.47
Cerebellar Nuclei4 ± 0.52
Claustrum3.76 ± 0.72
Epithalamus3.88 ± 0.64
Frontal Lobe4.19 ± 0.53
Globus Pallidus3.59 ± 0.41
Hypothalamus4.32 ± 0.43
Insula4.06 ± 0.53
Limbic Lobe3.99 ± 0.51
Mesencephalon3.98 ± 0.5
Myelencephalon4.11 ± 0.54
Occipital Lobe3.76 ± 0.53
Parietal Lobe3.99 ± 0.48
Pontine Tegmentum4.06 ± 0.53
Striatum3.9 ± 0.56
Subthalamus4.06 ± 0.38
Temporal Lobe4.25 ± 0.47
Thalamus4.13 ± 0.53
White Matter3.8 ± 0.71
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00070472 18 229 246 IIVPFVTCGDLSSYDSDR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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