Annotation Detail for SLC25A30
Basic Information Top
| Gene Symbol: | SLC25A30 ( KMCP1 ) |
|---|---|
| Gene Full Name: | solute carrier family 25, member 30 |
| Band: | 13q14.13 |
| Quick Links | Entrez ID:253512; OMIM: 610793; Uniprot ID:KMCP1_HUMAN; ENSEMBL ID: ENSG00000174032; HGNC ID: 27371 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.591230
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 5 / 564012 | 8 |  |
| neonate | 2 / 31097 | 64 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 39 / 1939121 | 20 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 1 / 114246 | 8 | |
| esophageal tumor | 2 / 17290 | 115 | |
| gastrointestinal tumor | 3 / 119369 | 25 | |
| germ cell tumor | 4 / 263845 | 15 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 4 / 136302 | 29 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 12 / 96359 | 124 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 43 / 3360307 | 12 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 1 / 104616 | 9 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 1 / 124949 | 8 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 11 / 1100989 | 9 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 2 / 211054 | 9 | |
| heart | 0 / 89626 | 0 | |
| intestine | 2 / 234472 | 8 | |
| kidney | 6 / 211777 | 28 | |
| larynx | 1 / 24145 | 41 | |
| liver | 14 / 207743 | 67 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 1 / 214812 | 4 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 1 / 210574 | 4 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 3 / 96619 | 31 | |
| testis | 6 / 330442 | 18 | |
| thymus | 4 / 81131 | 49 | |
| thyroid | 3 / 47473 | 63 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 6 / 52413 | 114 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_10695_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.39 ± 0.83 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 2.95 ± 0.35 | |
| Basal Part of Pons | 2.98 ± 0.39 | |
| Cerebellar Cortex | 3.13 ± 0.54 | |
| Cerebellar Nuclei | 3.12 ± 0.64 | |
| Claustrum | 3.09 ± 0.8 | |
| Epithalamus | 3.6 ± 0.46 | |
| Frontal Lobe | 3.08 ± 0.69 | |
| Globus Pallidus | 3.17 ± 0.67 | |
| Hypothalamus | 3.13 ± 0.63 | |
| Insula | 3.47 ± 1.02 | |
| Limbic Lobe | 3.2 ± 0.58 | |
| Mesencephalon | 3.32 ± 0.64 | |
| Myelencephalon | 3.19 ± 0.6 | |
| Occipital Lobe | 3.23 ± 0.52 | |
| Parietal Lobe | 3.08 ± 0.71 | |
| Pontine Tegmentum | 3.21 ± 0.78 | |
| Striatum | 3.71 ± 0.58 | |
| Subthalamus | 3.55 ± 0.49 | |
| Temporal Lobe | 3.19 ± 0.6 | |
| Thalamus | 2.95 ± 0.68 | |
| White Matter | 2.93 ± 1.11 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Slc25a30 | CB | Cerebellum | 5.76 | |
| 9.45 | | |||
| Slc25a30 | CTX | Cerebral cortex | 6.53 | |
| 6.31 | | |||
| Slc25a30 | HIP | Hippocampal region | 5.03 | |
| 5.2 | | |||
| Slc25a30 | HPF | Hippocampal formation | 7.51 | |
| 6.68 | | |||
| Slc25a30 | HY | Hypothalamus | 2.18 | |
| 2.09 | | |||
| Slc25a30 | LSX | Lateral septal complex | 1.88 | |
| 2.05 | | |||
| Slc25a30 | MB | Midbrain | 5.41 | |
| 6.42 | | |||
| Slc25a30 | MY | Medulla | 9.68 | |
| 9.66 | | |||
| Slc25a30 | OLF | Olfactory bulb | 9.3 | |
| 7.77 | | |||
| Slc25a30 | P | Pons | 4.73 | |
| 5.82 | | |||
| Slc25a30 | PAL | Pallidum | 4.05 | |
| 3.53 | | |||
| Slc25a30 | RHP | Retrohippocampal region | 10.21 | |
| 7.83 | | |||
| Slc25a30 | sAMY | Striatum-like amygdalar nuclei | 3.86 | |
| 3.79 | | |||
| Slc25a30 | STR | Striatum | 3.05 | |
| 2.82 | | |||
| Slc25a30 | STRd | Striatum dorsal region | 1.78 | |
| 1.68 | | |||
| Slc25a30 | STRv | Striatum ventral region | 7.92 | |
| 6.52 | | |||
| Slc25a30 | TH | Thalamus | 3.38 | |
| 2.86 | |