Annotation Detail for CNIH2
Basic Information Top
| Gene Symbol: | CNIH2 ( CNIH-2,Cnil,MGC50896 ) |
|---|---|
| Gene Full Name: | cornichon homolog 2 (Drosophila) |
| Band: | 11q13.2 |
| Quick Links | Entrez ID:254263; OMIM: 611288; Uniprot ID:CNIH2_HUMAN; ENSEMBL ID: ENSG00000174871; HGNC ID: 28744 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.437072
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 1 / 70761 | 14 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 9 / 564012 | 15 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 26 / 1939121 | 13 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 0 / 82823 | 0 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 2 / 263845 | 7 | |
| glioma | 6 / 106883 | 56 |  |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 38 / 3360307 | 11 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 17 / 1100989 | 15 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 4 / 215722 | 18 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 1 / 336974 | 2 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 1 / 153271 | 6 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 18 / 214812 | 83 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 0 / 280825 | 0 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 1 / 330442 | 3 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 1 / 232878 | 4 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: CUST_856_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 6.36 ± 0.88 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.74 ± 0.34 | |
| Basal Part of Pons | 5.23 ± 0.3 | |
| Cerebellar Cortex | 5.35 ± 0.46 | |
| Cerebellar Nuclei | 5.06 ± 0.47 | |
| Claustrum | 6.2 ± 0.66 | |
| Epithalamus | 5.09 ± 0.53 | |
| Frontal Lobe | 6.05 ± 0.61 | |
| Globus Pallidus | 5.02 ± 1.13 | |
| Hypothalamus | 5.38 ± 0.42 | |
| Insula | 5.99 ± 0.65 | |
| Limbic Lobe | 6.79 ± 0.73 | |
| Mesencephalon | 5.69 ± 0.69 | |
| Myelencephalon | 5.86 ± 0.7 | |
| Occipital Lobe | 5.13 ± 0.68 | |
| Parietal Lobe | 5.8 ± 0.85 | |
| Pontine Tegmentum | 5.76 ± 0.75 | |
| Striatum | 6.63 ± 0.56 | |
| Subthalamus | 4.72 ± 0.51 | |
| Temporal Lobe | 6.13 ± 0.66 | |
| Thalamus | 5.57 ± 0.71 | |
| White Matter | 2.5 ± 0.26 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Cnih2 | CB | Cerebellum | 25.02 | |
| 26.47 | | |||
| Cnih2 | CTX | Cerebral cortex | 37.12 | |
| 28.98 | | |||
| Cnih2 | HIP | Hippocampal region | 71.56 | |
| 84.1 | | |||
| Cnih2 | HPF | Hippocampal formation | 65.63 | |
| 74.52 | | |||
| Cnih2 | HY | Hypothalamus | 22.14 | |
| 14.94 | | |||
| Cnih2 | LSX | Lateral septal complex | 68.69 | |
| 54.76 | | |||
| Cnih2 | MB | Midbrain | 12.7 | |
| 10.04 | | |||
| Cnih2 | MY | Medulla | 18.29 | |
| 15.84 | | |||
| Cnih2 | OLF | Olfactory bulb | 56.88 | |
| 44.07 | | |||
| Cnih2 | P | Pons | 14.07 | |
| 11.77 | | |||
| Cnih2 | PAL | Pallidum | 17.89 | |
| 14.08 | | |||
| Cnih2 | RHP | Retrohippocampal region | 54.72 | |
| 50.4 | | |||
| Cnih2 | sAMY | Striatum-like amygdalar nuclei | 24.83 | |
| 16.83 | | |||
| Cnih2 | STR | Striatum | 26.44 | |
| 17.79 | | |||
| Cnih2 | STRd | Striatum dorsal region | 19.55 | |
| 13.12 | | |||
| Cnih2 | STRv | Striatum ventral region | 36.53 | |
| 21.2 | | |||
| Cnih2 | TH | Thalamus | 20.26 | |
| 16.87 | |