Annotation Detail for TMEM86B
Basic Information Top
| Gene Symbol: | TMEM86B ( MGC30208 ) |
|---|---|
| Gene Full Name: | transmembrane protein 86B |
| Band: | 19q13.42 |
| Quick Links | Entrez ID:255043; OMIM: NA; Uniprot ID:TM86B_HUMAN; ENSEMBL ID: ENSG00000180089; HGNC ID: 28448 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.135215
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 12 / 564012 | 21 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 10 / 1939121 | 5 |  |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 2 / 263845 | 7 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 0 / 97250 | 0 | |
| normal | 27 / 3360307 | 8 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 2 / 90257 | 22 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 4 / 71655 | 55 |  |
| bone marrow | 0 / 48801 | 0 | |
| brain | 4 / 1100989 | 3 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 0 / 215722 | 0 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 0 / 89626 | 0 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 2 / 207743 | 9 | |
| lung | 3 / 336974 | 8 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 2 / 214812 | 9 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 4 / 280825 | 14 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 0 / 330442 | 0 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 3 / 16999 | 176 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 2 / 232878 | 8 | |
| vascular | 0 / 51780 | 0 |
Microarray in - Probe name: A_24_P121956
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.02 ± 0.58 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.32 ± 0.57 | |
| Basal Part of Pons | 7.66 ± 0.23 | |
| Cerebellar Cortex | 7.57 ± 0.22 | |
| Cerebellar Nuclei | 8.55 ± 0.32 | |
| Claustrum | 8.45 ± 0.62 | |
| Epithalamus | 7.07 ± 0.51 | |
| Frontal Lobe | 8.02 ± 0.57 | |
| Globus Pallidus | 8.74 ± 0.37 | |
| Hypothalamus | 7.51 ± 0.83 | |
| Insula | 7.86 ± 0.64 | |
| Limbic Lobe | 8.02 ± 0.64 | |
| Mesencephalon | 8.23 ± 0.52 | |
| Myelencephalon | 8.15 ± 0.72 | |
| Occipital Lobe | 8.3 ± 0.67 | |
| Parietal Lobe | 8.17 ± 0.56 | |
| Pontine Tegmentum | 8.17 ± 0.61 | |
| Striatum | 8.73 ± 0.51 | |
| Subthalamus | 8.24 ± 0.65 | |
| Temporal Lobe | 7.9 ± 0.64 | |
| Thalamus | 8.49 ± 0.6 | |
| White Matter | 7.55 ± 0.1 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tmem86b | CB | Cerebellum | 3.59 | |
| 3.67 | | |||
| Tmem86b | CTX | Cerebral cortex | 10.66 | |
| 6.66 | | |||
| Tmem86b | HIP | Hippocampal region | 14.48 | |
| 13.27 | | |||
| Tmem86b | HPF | Hippocampal formation | 11.46 | |
| 9.33 | | |||
| Tmem86b | HY | Hypothalamus | 2.61 | |
| 1.58 | | |||
| Tmem86b | LSX | Lateral septal complex | 2.45 | |
| 2.09 | | |||
| Tmem86b | MB | Midbrain | 5.41 | |
| 4.44 | | |||
| Tmem86b | MY | Medulla | 8.1 | |
| 7.31 | | |||
| Tmem86b | OLF | Olfactory bulb | 10.78 | |
| 7.35 | | |||
| Tmem86b | P | Pons | 7.01 | |
| 5.54 | | |||
| Tmem86b | PAL | Pallidum | 3.85 | |
| 2.58 | | |||
| Tmem86b | RHP | Retrohippocampal region | 7.2 | |
| 4.69 | | |||
| Tmem86b | sAMY | Striatum-like amygdalar nuclei | 2.65 | |
| 1.49 | | |||
| Tmem86b | STR | Striatum | 4.77 | |
| 3.42 | | |||
| Tmem86b | STRd | Striatum dorsal region | 4.86 | |
| 3.72 | | |||
| Tmem86b | STRv | Striatum ventral region | 6.65 | |
| 4.01 | | |||
| Tmem86b | TH | Thalamus | 2.55 | |
| 2.19 | |