Annotation Detail for CBY1
Basic Information Top
| Gene Symbol: | CBY1 ( C22orf2,CBY,HS508I15A,PGEA1,PIGEA-14,PIGEA14,arb1 ) |
|---|---|
| Gene Full Name: | chibby homolog 1 (Drosophila) |
| Band: | 22q13.1 |
| Quick Links | Entrez ID:25776; OMIM: 607757; Uniprot ID:CBY1_HUMAN; ENSEMBL ID: ENSG00000100211; HGNC ID: 1307 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.718728
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 3 / 564012 | 5 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 11 / 1939121 | 5 | |
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 2 / 62319 | 32 | |
| fetus | 20 / 564012 | 35 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 94 / 1939121 | 48 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 1 / 263845 | 3 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 13 / 3360307 | 3 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 0 / 125191 | 0 | |
| uterine tumor | 0 / 90257 | 0 | |
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 30 / 94178 | 318 |  |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 2 / 114246 | 17 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 6 / 263845 | 22 | |
| glioma | 1 / 106883 | 9 | |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 1 / 95842 | 10 | |
| liver tumor | 1 / 96359 | 10 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 100 / 3360307 | 29 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 4 / 124949 | 32 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 6 / 1100989 | 5 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 0 / 149255 | 0 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 0 / 211054 | 0 | |
| heart | 1 / 89626 | 11 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 1 / 336974 | 2 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 0 / 214812 | 0 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 0 / 189345 | 0 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 4 / 232878 | 17 | |
| vascular | 0 / 51780 | 0 | |
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 13 / 1100989 | 11 | |
| cervix | 7 / 48171 | 145 | |
| connective tissue | 2 / 149255 | 13 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 7 / 215722 | 32 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 5 / 211054 | 23 | |
| heart | 2 / 89626 | 22 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 3 / 207743 | 14 | |
| lung | 14 / 336974 | 41 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 30 / 153271 | 195 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 2 / 102051 | 19 | |
| pancreas | 10 / 214812 | 46 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 6 / 41328 | 145 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 1 / 20155 | 49 | |
| skin | 8 / 210574 | 37 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 12 / 330442 | 36 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 12 / 232878 | 51 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 203450_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 8.2 | |
| Adipocyte | 9.05 | |
| AdrenalCortex | 13.3 | |
| Adrenalgland | 17.7 | |
| Amygdala | 8.3 | |
| Appendix | 8.85 | |
| AtrioventricularNode | 6.45 | |
| BDCA4+_DentriticCells | 7.1 | |
| Bonemarrow | 6.15 | |
| BronchialEpithelialCells | 15.75 | |
| CD105+_Endothelial | 10.45 | |
| CD14+_Monocytes | 6.95 | |
| CD19+_BCells(neg._sel.) | 8.1 | |
| CD33+_Myeloid | 4.75 | |
| CD34+ | 11.45 | |
| CD4+_Tcells | 9.95 | |
| CD56+_NKCells | 5.65 | |
| CD71+_EarlyErythroid | 9.3 | |
| CD8+_Tcells | 9.65 | |
| CardiacMyocytes | 13.05 | |
| Caudatenucleus | 8.35 | |
| Cerebellum | 7.2 | |
| CerebellumPeduncles | 9.95 | |
| CiliaryGanglion | 6.2 | |
| CingulateCortex | 9 | |
| Colorectaladenocarcinoma | 7.15 | |
| DorsalRootGanglion | 6.7 | |
| FetalThyroid | 18.15 | |
| Fetalbrain | 10.4 | |
| Fetalliver | 7.7 | |
| Fetallung | 11.65 | |
| GlobusPallidus | 6.25 | |
| Heart | 17.5 | |
| Hypothalamus | 11.15 | |
| Kidney | 8.7 | |
| Leukemia_chronicMyelogenousK-562 | 7.4 | |
| Leukemia_promyelocytic-HL-60 | 5.15 | |
| Leukemialymphoblastic(MOLT-4) | 5.8 | |
| Liver | 10.6 | |
| Lung | 10.55 | |
| Lymphnode | 7.7 | |
| Lymphoma_burkitts(Daudi) | 8.75 | |
| Lymphoma_burkitts(Raji) | 4.7 | |
| MedullaOblongata | 7.45 | |
| OccipitalLobe | 7.8 | |
| OlfactoryBulb | 10.9 | |
| Ovary | 5.85 | |
| Pancreas | 7.15 | |
| PancreaticIslet | 13.25 | |
| ParietalLobe | 9.15 | |
| Pituitary | 19.45 | |
| Placenta | 9.25 | |
| Pons | 8.25 | |
| PrefrontalCortex | 12.55 | |
| Prostate | 11.25 | |
| Salivarygland | 8.15 | |
| SkeletalMuscle | 10 | |
| Skin | 6.7 | |
| SmoothMuscle | 12.9 | |
| Spinalcord | 13.25 | |
| SubthalamicNucleus | 6.45 | |
| SuperiorCervicalGanglion | 9 | |
| TemporalLobe | 6.15 | |
| Testis | 13.45 | |
| TestisGermCell | 8.6 | |
| TestisIntersitial | 8.05 | |
| TestisLeydigCell | 9.8 | |
| TestisSeminiferousTubule | 8.45 | |
| Thalamus | 9.05 | |
| Thymus | 7.25 | |
| Thyroid | 11.65 | |
| Tongue | 8.55 | |
| Tonsil | 8.35 | |
| Trachea | 7.55 | |
| TrigeminalGanglion | 8.65 | |
| Uterus | 8.45 | |
| UterusCorpus | 7.9 | |
| WholeBlood | 6.75 | |
| Wholebrain | 7.15 | |
| colon | 9 | |
| pineal_day | 11.6 | |
| pineal_night | 13.14 | |
| retina | 13.5 | |
| small_intestine | 8.7 | |
- Probe name: CUST_9119_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.06 ± 0.64 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.15 ± 0.56 | |
| Basal Part of Pons | 4.21 ± 0.77 | |
| Cerebellar Cortex | 4.35 ± 0.34 | |
| Cerebellar Nuclei | 3.92 ± 0.51 | |
| Claustrum | 3.9 ± 0.74 | |
| Epithalamus | 4.67 ± 0.29 | |
| Frontal Lobe | 3.96 ± 0.53 | |
| Globus Pallidus | 4.23 ± 0.64 | |
| Hypothalamus | 3.76 ± 0.6 | |
| Insula | 4.09 ± 0.53 | |
| Limbic Lobe | 4.02 ± 0.43 | |
| Mesencephalon | 4.01 ± 0.5 | |
| Myelencephalon | 4.04 ± 0.52 | |
| Occipital Lobe | 4.27 ± 0.52 | |
| Parietal Lobe | 4.01 ± 0.44 | |
| Pontine Tegmentum | 3.96 ± 0.51 | |
| Striatum | 3.92 ± 0.58 | |
| Subthalamus | 4.26 ± 0.28 | |
| Temporal Lobe | 4.07 ± 0.47 | |
| Thalamus | 3.85 ± 0.54 | |
| White Matter | 4.81 ± 0.53 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| CBY1_HUMAN_82 | 11 | 82 | 92 | QQLEEENNLLR | PRIDE |