AutismKB 2.0

Annotation Detail for BAMBI


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Basic Information Top
Gene Symbol:BAMBI ( NMA )
Gene Full Name: BMP and activin membrane-bound inhibitor homolog (Xenopus laevis)
Band: 10p12.1
Quick LinksEntrez ID:25805; OMIM: 604444; Uniprot ID:BAMBI_HUMAN; ENSEMBL ID: ENSG00000095739; HGNC ID: 30251
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body18 / 70761254
blastocyst1 / 6231916
fetus39 / 56401269
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult89 / 193912145
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma3 / 17475171
breast (mammary gland) tumor5 / 9417853
cervical tumor0 / 343660 
chondrosarcoma3 / 8282336
colorectal tumor12 / 114246105
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor17 / 26384564
glioma5 / 10688346
head and neck tumor1 / 1363027
kidney tumor3 / 6895943
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma1 / 7175513
non-neoplasia1 / 9725010
normal156 / 336030746
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS10 / 12568079
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor17 / 124949136
soft tissue/muscle tissue tumor8 / 12519163
uterine tumor5 / 9025755
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland3 / 3319790
ascites1 / 4001524
bladder1 / 2975733
blood0 / 1234780 
bone4 / 7165555
bone marrow0 / 488010 
brain36 / 110098932
cervix0 / 481710 
connective tissue9 / 14925560
ear12 / 16212740
embryonic tissue24 / 215722111
esophagus0 / 202090 
eye18 / 21105485
heart1 / 8962611
intestine15 / 23447263
kidney11 / 21177751
larynx0 / 241450 
liver2 / 2077439
lung24 / 33697471
lymph1 / 4427022
lymph node0 / 916100 
mammary gland10 / 15327165
mouth1 / 6705214
muscle0 / 1077150 
nerve0 / 157680 
ovary2 / 10205119
pancreas6 / 21481227
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta19 / 28082567
prostate3 / 18934515
salivary gland0 / 201550 
skin17 / 21057480
spleen0 / 539520 
stomach2 / 9661920
testis4 / 33044212
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus5 / 23287821
vascular1 / 5178019
Microarray in BioGPS Top
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  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203304_at
Cell line Expression level Expression bar
721_B_lymphoblasts26.7
Adipocyte5.8
AdrenalCortex35.95
Adrenalgland35.8
Amygdala6.85
Appendix6.5
AtrioventricularNode4.55
BDCA4+_DentriticCells3.4
Bonemarrow5.7
BronchialEpithelialCells4.3
CD105+_Endothelial5.1
CD14+_Monocytes5.5
CD19+_BCells(neg._sel.)3.5
CD33+_Myeloid5.95
CD34+5.35
CD4+_Tcells3.35
CD56+_NKCells3.65
CD71+_EarlyErythroid3.7
CD8+_Tcells3
CardiacMyocytes22.35
Caudatenucleus5.7
Cerebellum4.7
CerebellumPeduncles6.55
CiliaryGanglion3.8
CingulateCortex5.9
Colorectaladenocarcinoma360.8
DorsalRootGanglion4.55
FetalThyroid4.6
Fetalbrain5.55
Fetalliver21.5
Fetallung20.5
GlobusPallidus4.25
Heart12.9
Hypothalamus12.65
Kidney9.65
Leukemia_chronicMyelogenousK-56210.7
Leukemia_promyelocytic-HL-604.45
Leukemialymphoblastic(MOLT-4)3.7
Liver9.25
Lung15.6
Lymphnode4.85
Lymphoma_burkitts(Daudi)6.7
Lymphoma_burkitts(Raji)8.15
MedullaOblongata5.25
OccipitalLobe5.3
OlfactoryBulb12.35
Ovary7
Pancreas15.65
PancreaticIslet6.2
ParietalLobe6.6
Pituitary6.85
Placenta22.4
Pons5.5
PrefrontalCortex7.35
Prostate6.85
Salivarygland4.65
SkeletalMuscle7.05
Skin4.55
SmoothMuscle44.25
Spinalcord30.05
SubthalamicNucleus4.3
SuperiorCervicalGanglion6.6
TemporalLobe4.85
Testis6.7
TestisGermCell20.9
TestisIntersitial4.7
TestisLeydigCell5.75
TestisSeminiferousTubule4.9
Thalamus9
Thymus4
Thyroid6.35
Tongue5.25
Tonsil5.1
Trachea6.85
TrigeminalGanglion6.05
Uterus13.7
UterusCorpus118.75
WholeBlood5.1
Wholebrain7.55
colon5.65
pineal_day7.98
pineal_night7.08
retina157.35
small_intestine5.45
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P122494
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.01 ± 0.99
Basal Forebrain1.64 ± 0.21
Basal Part of Pons1.24 ± 0.36
Cerebellar Cortex1.5 ± 0.69
Cerebellar Nuclei1.89 ± 0.72
Claustrum2.48 ± 0.84
Epithalamus1.62 ± 0.57
Frontal Lobe1.5 ± 0.65
Globus Pallidus2.15 ± 0.31
Hypothalamus1.68 ± 0.65
Insula1.44 ± 0.42
Limbic Lobe1.63 ± 0.64
Mesencephalon1.73 ± 0.63
Myelencephalon1.65 ± 0.59
Occipital Lobe1.69 ± 0.63
Parietal Lobe1.56 ± 0.63
Pontine Tegmentum1.68 ± 0.68
Striatum1.79 ± 0.48
Subthalamus1.75 ± 0.6
Temporal Lobe1.48 ± 0.54
Thalamus1.59 ± 0.56
White Matter2.14 ± 0.31
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
BambiCBCerebellum4.26
4.75
BambiCTXCerebral cortex4.1
3.7
BambiHIPHippocampal region11.48
10.72
BambiHPFHippocampal formation11.05
9.25
BambiHYHypothalamus7.46
6.06
BambiLSXLateral septal complex1.34
1.06
BambiMBMidbrain4.48
4.09
BambiMYMedulla13.79
12.64
BambiOLFOlfactory bulb36.61
29.06
BambiPPons13.47
14.79
BambiPALPallidum7.53
5.33
BambiRHPRetrohippocampal region8.48
5.68
BambisAMYStriatum-like amygdalar nuclei4.52
2.84
BambiSTRStriatum4.47
3.07
BambiSTRdStriatum dorsal region3.32
2.44
BambiSTRvStriatum ventral region9.15
5.51
BambiTHThalamus13.04
9.61
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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