Annotation Detail for ARIH1
Basic Information Top
| Gene Symbol: | ARIH1 ( ARI,DKFZp686O13120,FLJ20329,FLJ93118,HARI,HHARI,UBCH7BP ) |
|---|---|
| Gene Full Name: | ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila) |
| Band: | 15q24.1 |
| Quick Links | Entrez ID:25820; OMIM: 605624; Uniprot ID:ARI1_HUMAN; ENSEMBL ID: ENSG00000166233; HGNC ID: 689 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.268787
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 8 / 70761 | 113 |  |
| blastocyst | 5 / 62319 | 80 | |
| fetus | 61 / 564012 | 108 | |
| neonate | 1 / 31097 | 32 |  |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 140 / 1939121 | 72 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 2 / 12794 | 156 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 1 / 94178 | 10 |  |
| cervical tumor | 6 / 34366 | 174 | |
| chondrosarcoma | 10 / 82823 | 120 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 2 / 119369 | 16 | |
| germ cell tumor | 33 / 263845 | 125 | |
| glioma | 3 / 106883 | 28 | |
| head and neck tumor | 8 / 136302 | 58 | |
| kidney tumor | 4 / 68959 | 58 | |
| leukemia | 9 / 95842 | 93 | |
| liver tumor | 5 / 96359 | 51 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 2 / 97250 | 20 | |
| normal | 243 / 3360307 | 72 | |
| ovarian tumor | 8 / 76682 | 104 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 7 / 125680 | 55 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 3 / 46356 | 64 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 4 / 125191 | 31 | |
| uterine tumor | 7 / 90257 | 77 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 2 / 33197 | 60 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 4 / 29757 | 134 | |
| blood | 10 / 123478 | 80 | |
| bone | 10 / 71655 | 139 | |
| bone marrow | 5 / 48801 | 102 | |
| brain | 33 / 1100989 | 29 | |
| cervix | 11 / 48171 | 228 |  |
| connective tissue | 6 / 149255 | 40 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 14 / 215722 | 64 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 17 / 211054 | 80 | |
| heart | 10 / 89626 | 111 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 14 / 211777 | 66 | |
| larynx | 3 / 24145 | 124 | |
| liver | 10 / 207743 | 48 | |
| lung | 30 / 336974 | 89 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 12 / 91610 | 130 | |
| mammary gland | 10 / 153271 | 65 | |
| mouth | 6 / 67052 | 89 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 2 / 15768 | 126 | |
| ovary | 7 / 102051 | 68 | |
| pancreas | 16 / 214812 | 74 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 15 / 280825 | 53 | |
| prostate | 10 / 189345 | 52 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 19 / 210574 | 90 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 2 / 96619 | 20 | |
| testis | 36 / 330442 | 108 | |
| thymus | 2 / 81131 | 24 | |
| thyroid | 1 / 47473 | 21 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 6 / 52413 | 114 | |
| umbilical cord | 1 / 13680 | 73 | |
| uterus | 19 / 232878 | 81 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 201878_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 14.45 | |
| Adipocyte | 5.75 | |
| AdrenalCortex | 8 | |
| Adrenalgland | 5.45 | |
| Amygdala | 10.3 | |
| Appendix | 6.75 | |
| AtrioventricularNode | 6.25 | |
| BDCA4+_DentriticCells | 10.55 | |
| Bonemarrow | 6.35 | |
| BronchialEpithelialCells | 6.85 | |
| CD105+_Endothelial | 6.8 | |
| CD14+_Monocytes | 9.5 | |
| CD19+_BCells(neg._sel.) | 6.55 | |
| CD33+_Myeloid | 24.65 | |
| CD34+ | 20.25 | |
| CD4+_Tcells | 12.65 | |
| CD56+_NKCells | 8.3 | |
| CD71+_EarlyErythroid | 5.9 | |
| CD8+_Tcells | 12.65 | |
| CardiacMyocytes | 11.2 | |
| Caudatenucleus | 5.65 | |
| Cerebellum | 5.55 | |
| CerebellumPeduncles | 7.85 | |
| CiliaryGanglion | 5.2 | |
| CingulateCortex | 8.6 | |
| Colorectaladenocarcinoma | 6.35 | |
| DorsalRootGanglion | 5.85 | |
| FetalThyroid | 6.1 | |
| Fetalbrain | 10.05 | |
| Fetalliver | 5.45 | |
| Fetallung | 5.3 | |
| GlobusPallidus | 6 | |
| Heart | 8.5 | |
| Hypothalamus | 7.85 | |
| Kidney | 5.05 | |
| Leukemia_chronicMyelogenousK-562 | 6.85 | |
| Leukemia_promyelocytic-HL-60 | 5.65 | |
| Leukemialymphoblastic(MOLT-4) | 6.35 | |
| Liver | 9.9 | |
| Lung | 6.2 | |
| Lymphnode | 4.85 | |
| Lymphoma_burkitts(Daudi) | 8.3 | |
| Lymphoma_burkitts(Raji) | 9.3 | |
| MedullaOblongata | 10.5 | |
| OccipitalLobe | 6.25 | |
| OlfactoryBulb | 4.95 | |
| Ovary | 4.5 | |
| Pancreas | 5.45 | |
| PancreaticIslet | 8 | |
| ParietalLobe | 9.65 | |
| Pituitary | 8.15 | |
| Placenta | 7.55 | |
| Pons | 5.9 | |
| PrefrontalCortex | 15.05 | |
| Prostate | 7.25 | |
| Salivarygland | 5.25 | |
| SkeletalMuscle | 9.75 | |
| Skin | 5 | |
| SmoothMuscle | 7.55 | |
| Spinalcord | 7.6 | |
| SubthalamicNucleus | 5.9 | |
| SuperiorCervicalGanglion | 7.6 | |
| TemporalLobe | 5.8 | |
| Testis | 8.75 | |
| TestisGermCell | 9.5 | |
| TestisIntersitial | 12.5 | |
| TestisLeydigCell | 6.7 | |
| TestisSeminiferousTubule | 8.05 | |
| Thalamus | 10.95 | |
| Thymus | 4.65 | |
| Thyroid | 8.05 | |
| Tongue | 6.25 | |
| Tonsil | 6.45 | |
| Trachea | 4.8 | |
| TrigeminalGanglion | 6.7 | |
| Uterus | 8.6 | |
| UterusCorpus | 5.65 | |
| WholeBlood | 7.7 | |
| Wholebrain | 12.75 | |
| colon | 6.95 | |
| pineal_day | 27.46 | |
| pineal_night | 34.62 | |
| retina | 7.725 | |
| small_intestine | 5.5 | |
- Probe name: A_23_P205855
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.46 ± 0.45 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 5.35 ± 0.42 | |
| Basal Part of Pons | 5.75 ± 0.34 | |
| Cerebellar Cortex | 5.84 ± 0.19 | |
| Cerebellar Nuclei | 5.57 ± 0.57 | |
| Claustrum | 5.39 ± 0.43 | |
| Epithalamus | 5.82 ± 0.36 | |
| Frontal Lobe | 5.59 ± 0.39 | |
| Globus Pallidus | 4.99 ± 0.31 | |
| Hypothalamus | 5.61 ± 0.16 | |
| Insula | 5.6 ± 0.24 | |
| Limbic Lobe | 5.42 ± 0.46 | |
| Mesencephalon | 5.57 ± 0.45 | |
| Myelencephalon | 5.49 ± 0.41 | |
| Occipital Lobe | 5.52 ± 0.39 | |
| Parietal Lobe | 5.64 ± 0.37 | |
| Pontine Tegmentum | 5.49 ± 0.43 | |
| Striatum | 5.31 ± 0.39 | |
| Subthalamus | 5.7 ± 0.16 | |
| Temporal Lobe | 5.53 ± 0.4 | |
| Thalamus | 5.45 ± 0.37 | |
| White Matter | 5.21 ± 0.24 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Arih1 | CB | Cerebellum | 57.55 | |
| 100 | | |||
| Arih1 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Arih1 | HIP | Hippocampal region | 100 | |
| 100 | | |||
| Arih1 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Arih1 | HY | Hypothalamus | 66.29 | |
| 62.12 | | |||
| Arih1 | LSX | Lateral septal complex | 98.67 | |
| 89.79 | | |||
| Arih1 | MB | Midbrain | 82.71 | |
| 90.38 | | |||
| Arih1 | MY | Medulla | 60.59 | |
| 86.24 | | |||
| Arih1 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Arih1 | P | Pons | 59.54 | |
| 79.66 | | |||
| Arih1 | PAL | Pallidum | 73.03 | |
| 77.73 | | |||
| Arih1 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Arih1 | sAMY | Striatum-like amygdalar nuclei | 85.83 | |
| 72.19 | | |||
| Arih1 | STR | Striatum | 100 | |
| 92.63 | | |||
| Arih1 | STRd | Striatum dorsal region | 100 | |
| 95.19 | | |||
| Arih1 | STRv | Striatum ventral region | 100 | |
| 96.85 | | |||
| Arih1 | TH | Thalamus | 99.29 | |
| 100 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00026451 | 13 | 157 | 169 | LFAECHVINPSKK | Peptide Atlas |