Annotation Detail for HECTD1
Basic Information Top
| Gene Symbol: | HECTD1 ( FLJ38315,KIAA1131 ) |
|---|---|
| Gene Full Name: | HECT domain containing 1 |
| Band: | 14q12 |
| Quick Links | Entrez ID:25831; OMIM: NA; Uniprot ID:HECD1_HUMAN; ENSEMBL ID: ENSG00000092148; HGNC ID: 20157 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.708017
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 6 / 62319 | 96 |  |
| fetus | 39 / 564012 | 69 | |
| neonate | 1 / 31097 | 32 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 209 / 1939121 | 107 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 1 / 12794 | 78 | |
| bladder carcinoma | 2 / 17475 | 114 | |
| breast (mammary gland) tumor | 13 / 94178 | 138 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 10 / 82823 | 120 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 9 / 119369 | 75 | |
| germ cell tumor | 26 / 263845 | 98 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 28 / 136302 | 205 |  |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 3 / 95842 | 31 | |
| liver tumor | 8 / 96359 | 83 | |
| lung tumor | 4 / 103127 | 38 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 6 / 97250 | 61 | |
| normal | 233 / 3360307 | 69 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 2 / 104616 | 19 | |
| primitive neuroectodermal tumor of the CNS | 10 / 125680 | 79 | |
| prostate cancer | 24 / 102680 | 233 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 6 / 124949 | 48 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 12 / 90257 | 132 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 3 / 13106 | 228 | |
| adrenal gland | 4 / 33197 | 120 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 5 / 29757 | 168 | |
| blood | 6 / 123478 | 48 | |
| bone | 7 / 71655 | 97 | |
| bone marrow | 5 / 48801 | 102 | |
| brain | 68 / 1100989 | 61 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 12 / 149255 | 80 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 13 / 215722 | 60 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 11 / 211054 | 52 | |
| heart | 5 / 89626 | 55 | |
| intestine | 9 / 234472 | 38 | |
| kidney | 23 / 211777 | 108 | |
| larynx | 2 / 24145 | 82 | |
| liver | 16 / 207743 | 77 | |
| lung | 14 / 336974 | 41 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 10 / 91610 | 109 | |
| mammary gland | 32 / 153271 | 208 | |
| mouth | 11 / 67052 | 164 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 2 / 214812 | 9 |  |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 5 / 41328 | 120 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 28 / 280825 | 99 | |
| prostate | 30 / 189345 | 158 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 13 / 210574 | 61 | |
| spleen | 6 / 53952 | 111 | |
| stomach | 6 / 96619 | 62 | |
| testis | 23 / 330442 | 69 | |
| thymus | 6 / 81131 | 73 | |
| thyroid | 15 / 47473 | 315 | |
| tonsil | 2 / 16999 | 117 | |
| trachea | 14 / 52413 | 267 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 20 / 232878 | 85 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: CUST_5461_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 4.85 ± 0.58 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.62 ± 0.3 | |
| Basal Part of Pons | 5.04 ± 0.44 | |
| Cerebellar Cortex | 5.09 ± 0.38 | |
| Cerebellar Nuclei | 5.05 ± 0.43 | |
| Claustrum | 4.32 ± 0.71 | |
| Epithalamus | 5 ± 0.44 | |
| Frontal Lobe | 4.96 ± 0.48 | |
| Globus Pallidus | 4.6 ± 0.49 | |
| Hypothalamus | 5 ± 0.67 | |
| Insula | 4.99 ± 0.21 | |
| Limbic Lobe | 4.69 ± 0.55 | |
| Mesencephalon | 4.78 ± 0.54 | |
| Myelencephalon | 4.85 ± 0.52 | |
| Occipital Lobe | 4.5 ± 0.59 | |
| Parietal Lobe | 4.86 ± 0.4 | |
| Pontine Tegmentum | 4.86 ± 0.55 | |
| Striatum | 4.52 ± 0.5 | |
| Subthalamus | 4.98 ± 0.34 | |
| Temporal Lobe | 4.97 ± 0.48 | |
| Thalamus | 4.89 ± 0.48 | |
| White Matter | 5.29 ± 0.16 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Hectd1 | CB | Cerebellum | 28.4 | |
| 49.46 | | |||
| Hectd1 | CTX | Cerebral cortex | 88.29 | |
| 78.41 | | |||
| Hectd1 | HIP | Hippocampal region | 45.2 | |
| 83.83 | | |||
| Hectd1 | HPF | Hippocampal formation | 53.53 | |
| 74.38 | | |||
| Hectd1 | HY | Hypothalamus | 34.92 | |
| 30.68 | | |||
| Hectd1 | LSX | Lateral septal complex | 58.94 | |
| 49.87 | | |||
| Hectd1 | MB | Midbrain | 40.56 | |
| 43.8 | | |||
| Hectd1 | MY | Medulla | 54.85 | |
| 73.37 | | |||
| Hectd1 | OLF | Olfactory bulb | 71.74 | |
| 69.08 | | |||
| Hectd1 | P | Pons | 47.76 | |
| 60.81 | | |||
| Hectd1 | PAL | Pallidum | 43.63 | |
| 45.25 | | |||
| Hectd1 | RHP | Retrohippocampal region | 69.72 | |
| 64.73 | | |||
| Hectd1 | sAMY | Striatum-like amygdalar nuclei | 48.88 | |
| 40.1 | | |||
| Hectd1 | STR | Striatum | 56.54 | |
| 45.05 | | |||
| Hectd1 | STRd | Striatum dorsal region | 56.43 | |
| 45.2 | | |||
| Hectd1 | STRv | Striatum ventral region | 62.76 | |
| 47.19 | | |||
| Hectd1 | TH | Thalamus | 48.6 | |
| 49.44 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| HECD1_HUMAN_1560 | 11 | 1560 | 1570 | TNATNNMNLSR | PRIDE |
| PAp00036162 | 19 | 240 | 258 | MAAAGGTVSGPSSACKPGR | Peptide Atlas |