AutismKB 2.0

Annotation Detail for RAB26


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Basic Information Top
Gene Symbol:RAB26 ( V46133 )
Gene Full Name: RAB26, member RAS oncogene family
Band: 16p13.3
Quick LinksEntrez ID:25837; OMIM: 605455; Uniprot ID:RAB26_HUMAN; ENSEMBL ID: ENSG00000167964; HGNC ID: 14259
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus9 / 56401215
neonate0 / 310970 
infant2 / 2362084
juvenile0 / 555560 
adult59 / 193912130
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma1 / 8282312
colorectal tumor4 / 11424635
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor0 / 1363020 
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor20 / 96359207
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia2 / 9725020
normal37 / 336030711
ovarian tumor0 / 766820 
pancreatic tumor9 / 10461686
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer23 / 102680223
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood0 / 1234780 
bone1 / 7165513
bone marrow0 / 488010 
brain24 / 110098921
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye3 / 21105414
heart0 / 896260 
intestine4 / 23447217
kidney2 / 2117779
larynx0 / 241450 
liver20 / 20774396
lung11 / 33697432
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle0 / 1077150 
nerve0 / 157680 
ovary2 / 10205119
pancreas15 / 21481269
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate23 / 189345121
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus1 / 8113112
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219562_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.7
Adipocyte14.95
AdrenalCortex15.3
Adrenalgland12.45
Amygdala45.85
Appendix14.95
AtrioventricularNode11.05
BDCA4+_DentriticCells6.9
Bonemarrow15.05
BronchialEpithelialCells14.9
CD105+_Endothelial9.3
CD14+_Monocytes10.7
CD19+_BCells(neg._sel.)11.45
CD33+_Myeloid10.65
CD34+9.85
CD4+_Tcells7.8
CD56+_NKCells7.3
CD71+_EarlyErythroid13.65
CD8+_Tcells6.95
CardiacMyocytes19.5
Caudatenucleus31.55
Cerebellum32.5
CerebellumPeduncles66.2
CiliaryGanglion10.25
CingulateCortex43.65
Colorectaladenocarcinoma15.2
DorsalRootGanglion11.2
FetalThyroid14.6
Fetalbrain15.4
Fetalliver12.75
Fetallung12.55
GlobusPallidus16.9
Heart18.85
Hypothalamus23.05
Kidney12.15
Leukemia_chronicMyelogenousK-56213.45
Leukemia_promyelocytic-HL-6013.1
Leukemialymphoblastic(MOLT-4)12.15
Liver90.25
Lung16.75
Lymphnode14.45
Lymphoma_burkitts(Daudi)19.1
Lymphoma_burkitts(Raji)21.05
MedullaOblongata31.1
OccipitalLobe28.05
OlfactoryBulb11.75
Ovary10.15
Pancreas17.45
PancreaticIslet41.1
ParietalLobe19.65
Pituitary30.4
Placenta10.75
Pons14.35
PrefrontalCortex70.15
Prostate18.05
Salivarygland18.05
SkeletalMuscle16.6
Skin11.25
SmoothMuscle17.15
Spinalcord15.8
SubthalamicNucleus20.25
SuperiorCervicalGanglion16.95
TemporalLobe37.9
Testis12.65
TestisGermCell12.35
TestisIntersitial12.6
TestisLeydigCell14.9
TestisSeminiferousTubule12.9
Thalamus15.2
Thymus12.15
Thyroid21.6
Tongue14.55
Tonsil14.75
Trachea12.7
TrigeminalGanglion14.55
Uterus12.45
UterusCorpus13.1
WholeBlood16.55
Wholebrain74.8
colon15.15
pineal_day89.08
pineal_night105.34
retina15.725
small_intestine14.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_886_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala4.91 ± 1.03
Basal Forebrain4.4 ± 0.42
Basal Part of Pons4.73 ± 0.53
Cerebellar Cortex5.37 ± 0.45
Cerebellar Nuclei4.28 ± 0.34
Claustrum4.31 ± 0.93
Epithalamus4.27 ± 0.59
Frontal Lobe4.8 ± 0.74
Globus Pallidus2.87 ± 0.64
Hypothalamus4.06 ± 0.65
Insula4.82 ± 0.48
Limbic Lobe4.92 ± 0.78
Mesencephalon4.54 ± 0.61
Myelencephalon4.53 ± 0.75
Occipital Lobe4.3 ± 0.6
Parietal Lobe4.52 ± 0.73
Pontine Tegmentum4.65 ± 0.8
Striatum4.46 ± 0.56
Subthalamus4.08 ± 0.78
Temporal Lobe4.88 ± 0.67
Thalamus4.14 ± 0.73
White Matter2.86 ± 0.19
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rab26CBCerebellum29.19
33.29
Rab26CTXCerebral cortex100
94
Rab26HIPHippocampal region57.72
99.05
Rab26HPFHippocampal formation73.44
97.52
Rab26HYHypothalamus39.78
30.44
Rab26LSXLateral septal complex80.74
64.64
Rab26MBMidbrain44.42
36.82
Rab26MYMedulla56.12
59.08
Rab26OLFOlfactory bulb81.41
78.69
Rab26PPons50.05
48.15
Rab26PALPallidum33.03
27.39
Rab26RHPRetrohippocampal region97.47
96.03
Rab26sAMYStriatum-like amygdalar nuclei63.59
48.97
Rab26STRStriatum53.09
41.86
Rab26STRdStriatum dorsal region54.7
44.99
Rab26STRvStriatum ventral region31.82
21.22
Rab26THThalamus30.53
29.95
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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