AutismKB 2.0

Annotation Detail for BRP44


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Basic Information Top
Gene Symbol:BRP44 ( DKFZp564B167,MGC125752,MGC125753 )
Gene Full Name: brain protein 44
Band: 1q24
Quick LinksEntrez ID:25874; OMIM: NA; Uniprot ID:BR44_HUMAN; ENSEMBL ID: ENSG00000143158; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst2 / 6231932
fetus38 / 56401267
neonate2 / 3109764
infant0 / 236200 
juvenile3 / 5555653
adult151 / 193912177
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor8 / 9417884
cervical tumor3 / 3436687
chondrosarcoma3 / 8282336
colorectal tumor5 / 11424643
esophageal tumor0 / 172900 
gastrointestinal tumor4 / 11936933
germ cell tumor5 / 26384518
glioma9 / 10688384
head and neck tumor6 / 13630244
kidney tumor5 / 6895972
leukemia5 / 9584252
liver tumor10 / 96359103
lung tumor0 / 1031270 
lymphoma2 / 7175527
non-neoplasia2 / 9725020
normal241 / 336030771
ovarian tumor4 / 7668252
pancreatic tumor6 / 10461657
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer34 / 102680331
retinoblastoma0 / 463560 
skin tumor6 / 12494948
soft tissue/muscle tissue tumor7 / 12519155
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites1 / 4001524
bladder0 / 297570 
blood14 / 123478113
bone7 / 7165597
bone marrow1 / 4880120
brain65 / 110098959
cervix3 / 4817162
connective tissue3 / 14925520
ear2 / 16212123
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye15 / 21105471
heart8 / 8962689
intestine7 / 23447229
kidney25 / 211777118
larynx1 / 2414541
liver15 / 20774372
lung24 / 33697471
lymph1 / 4427022
lymph node9 / 9161098
mammary gland12 / 15327178
mouth3 / 6705244
muscle3 / 10771527
nerve0 / 157680 
ovary4 / 10205139
pancreas35 / 214812162
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland1 / 1658560
placenta20 / 28082571
prostate41 / 189345216
salivary gland1 / 2015549
skin10 / 21057447
spleen4 / 5395274
stomach3 / 9661931
testis16 / 33044248
thymus4 / 8113149
thyroid1 / 4747321
tonsil3 / 16999176
trachea2 / 5241338
umbilical cord3 / 13680219
uterus9 / 23287838
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202427_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts494.05
Adipocyte514.4
AdrenalCortex88.25
Adrenalgland143.5
Amygdala329.65
Appendix79.95
AtrioventricularNode33.35
BDCA4+_DentriticCells182.55
Bonemarrow218.05
BronchialEpithelialCells218.15
CD105+_Endothelial1421.45
CD14+_Monocytes119.55
CD19+_BCells(neg._sel.)224.8
CD33+_Myeloid228.1
CD34+887.45
CD4+_Tcells84.75
CD56+_NKCells238.05
CD71+_EarlyErythroid1098.55
CD8+_Tcells99.95
CardiacMyocytes114.1
Caudatenucleus112.15
Cerebellum152.1
CerebellumPeduncles147.75
CiliaryGanglion33.65
CingulateCortex97.45
Colorectaladenocarcinoma169.75
DorsalRootGanglion24.85
FetalThyroid121.3
Fetalbrain152.3
Fetalliver523.65
Fetallung150.5
GlobusPallidus72.75
Heart431
Hypothalamus189.05
Kidney335.7
Leukemia_chronicMyelogenousK-562227.85
Leukemia_promyelocytic-HL-60668.45
Leukemialymphoblastic(MOLT-4)247.55
Liver848.9
Lung342.8
Lymphnode99.05
Lymphoma_burkitts(Daudi)407
Lymphoma_burkitts(Raji)533.9
MedullaOblongata107.45
OccipitalLobe125.25
OlfactoryBulb69.2
Ovary33.4
Pancreas86.75
PancreaticIslet170.15
ParietalLobe98.25
Pituitary171.8
Placenta93.75
Pons73.3
PrefrontalCortex188.25
Prostate1927.2
Salivarygland96.95
SkeletalMuscle83.75
Skin41.95
SmoothMuscle333.75
Spinalcord130.7
SubthalamicNucleus107.05
SuperiorCervicalGanglion54.65
TemporalLobe126.4
Testis1326.4
TestisGermCell617.85
TestisIntersitial2696.2
TestisLeydigCell869.8
TestisSeminiferousTubule588.85
Thalamus127.6
Thymus168.25
Thyroid341.95
Tongue82.2
Tonsil81.75
Trachea141.6
TrigeminalGanglion9.3
Uterus128.85
UterusCorpus44.75
WholeBlood161.75
Wholebrain636.7
colon692.85
pineal_day341.06
pineal_night319.24
retina188.8
small_intestine487.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P114929
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.28 ± 0.22
Basal Forebrain10.18 ± 0.21
Basal Part of Pons10.19 ± 0.21
Cerebellar Cortex10.25 ± 0.24
Cerebellar Nuclei10.67 ± 0.28
Claustrum9.97 ± 0.42
Epithalamus10.13 ± 0.25
Frontal Lobe10.52 ± 0.37
Globus Pallidus9.96 ± 0.33
Hypothalamus10.56 ± 0.13
Insula10.49 ± 0.21
Limbic Lobe10.16 ± 0.43
Mesencephalon10.32 ± 0.33
Myelencephalon10.24 ± 0.36
Occipital Lobe10.02 ± 0.36
Parietal Lobe10.42 ± 0.33
Pontine Tegmentum10.46 ± 0.36
Striatum10.12 ± 0.34
Subthalamus10.92 ± 0.31
Temporal Lobe10.4 ± 0.26
Thalamus10.29 ± 0.28
White Matter9.66 ± 0.38
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
BR44_HUMAN_0 0 0 0 TVFFWAPIMK PRIDE
PAp00005307 12 28 39 LRPLYNHPAGPR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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