AutismKB 2.0

Annotation Detail for MXRA5


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Basic Information Top
Gene Symbol:MXRA5 ( DKFZp564I1922 )
Gene Full Name: matrix-remodelling associated 5
Band: Xp22.33
Quick LinksEntrez ID:25878; OMIM: NA; Uniprot ID:MXRA5_HUMAN; ENSEMBL ID: ENSG00000101825; HGNC ID: 7539
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body8 / 70761113
blastocyst1 / 6231916
fetus26 / 56401246
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult74 / 193912138
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor2 / 9417821
cervical tumor0 / 343660 
chondrosarcoma5 / 8282360
colorectal tumor2 / 11424617
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor1 / 2638453
glioma0 / 1068830 
head and neck tumor10 / 13630273
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor0 / 963590 
lung tumor2 / 10312719
lymphoma1 / 7175513
non-neoplasia5 / 9725051
normal83 / 336030724
ovarian tumor4 / 7668252
pancreatic tumor8 / 10461676
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma1 / 4635621
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor11 / 12519187
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue3 / 13106228
adrenal gland0 / 331970 
ascites0 / 400150 
bladder0 / 297570 
blood0 / 1234780 
bone8 / 71655111
bone marrow1 / 4880120
brain1 / 11009890 
cervix0 / 481710 
connective tissue8 / 14925553
ear9 / 16212555
embryonic tissue11 / 21572250
esophagus0 / 202090 
eye2 / 2110549
heart4 / 8962644
intestine4 / 23447217
kidney1 / 2117774
larynx1 / 2414541
liver1 / 2077434
lung4 / 33697411
lymph1 / 4427022
lymph node0 / 916100 
mammary gland15 / 15327197
mouth5 / 6705274
muscle10 / 10771592
nerve0 / 157680 
ovary4 / 10205139
pancreas14 / 21481265
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta4 / 28082514
prostate0 / 1893450 
salivary gland0 / 201550 
skin3 / 21057414
spleen0 / 539520 
stomach5 / 9661951
testis0 / 3304420 
thymus1 / 8113112
thyroid7 / 47473147
tonsil0 / 169990 
trachea4 / 5241376
umbilical cord0 / 136800 
uterus9 / 23287838
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 209596_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.9
Adipocyte10.7
AdrenalCortex102.5
Adrenalgland60.05
Amygdala6.7
Appendix20.35
AtrioventricularNode6.95
BDCA4+_DentriticCells7
Bonemarrow6.45
BronchialEpithelialCells6.35
CD105+_Endothelial8.9
CD14+_Monocytes6.6
CD19+_BCells(neg._sel.)6.9
CD33+_Myeloid6.7
CD34+7.55
CD4+_Tcells6.95
CD56+_NKCells6.65
CD71+_EarlyErythroid5.6
CD8+_Tcells5.5
CardiacMyocytes8.05
Caudatenucleus5.85
Cerebellum5.3
CerebellumPeduncles7.35
CiliaryGanglion15.6
CingulateCortex6.7
Colorectaladenocarcinoma5.65
DorsalRootGanglion6.7
FetalThyroid7.3
Fetalbrain6.4
Fetalliver5.55
Fetallung5.25
GlobusPallidus5
Heart8.15
Hypothalamus6.7
Kidney10.5
Leukemia_chronicMyelogenousK-5625.85
Leukemia_promyelocytic-HL-605.65
Leukemialymphoblastic(MOLT-4)5.25
Liver8.5
Lung23.95
Lymphnode7.15
Lymphoma_burkitts(Daudi)8.25
Lymphoma_burkitts(Raji)8.9
MedullaOblongata5.9
OccipitalLobe5.75
OlfactoryBulb5.15
Ovary6.95
Pancreas6.35
PancreaticIslet7
ParietalLobe7.3
Pituitary7.65
Placenta22.5
Pons6.75
PrefrontalCortex6.95
Prostate34.55
Salivarygland7.85
SkeletalMuscle8.7
Skin11.4
SmoothMuscle6.8
Spinalcord7.15
SubthalamicNucleus5.8
SuperiorCervicalGanglion14.7
TemporalLobe5.9
Testis5.3
TestisGermCell5.5
TestisIntersitial5.4
TestisLeydigCell7.35
TestisSeminiferousTubule5.95
Thalamus6.55
Thymus16.5
Thyroid114.8
Tongue25.2
Tonsil8.35
Trachea31.45
TrigeminalGanglion10.65
Uterus122.45
UterusCorpus14.1
WholeBlood5.8
Wholebrain5.45
colon122.4
pineal_day14.74
pineal_night17.84
retina71.6
small_intestine223.25
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6907_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala1.9 ± 1
Basal Forebrain1.49 ± 0.22
Basal Part of Pons1.29 ± 0.67
Cerebellar Cortex1.25 ± 0.66
Cerebellar Nuclei1.77 ± 0.76
Claustrum2.42 ± 0.96
Epithalamus1.18 ± 0.83
Frontal Lobe1.35 ± 0.72
Globus Pallidus2 ± 0.26
Hypothalamus1.52 ± 0.72
Insula1.4 ± 0.71
Limbic Lobe1.41 ± 0.64
Mesencephalon1.6 ± 0.73
Myelencephalon1.51 ± 0.73
Occipital Lobe1.62 ± 0.92
Parietal Lobe1.48 ± 0.75
Pontine Tegmentum1.56 ± 0.77
Striatum1.57 ± 0.51
Subthalamus1.8 ± 0.4
Temporal Lobe1.4 ± 0.83
Thalamus1.53 ± 0.79
White Matter1.8 ± 0.25
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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