Annotation Detail for DCAF13
Basic Information Top
| Gene Symbol: | DCAF13 ( DKFZp564O0463,GM83,MGC126859,MGC138247,WDSOF1 ) |
|---|---|
| Gene Full Name: | DDB1 and CUL4 associated factor 13 |
| Band: | 8q22.3 |
| Quick Links | Entrez ID:25879; OMIM: NA; Uniprot ID:DCA13_HUMAN; ENSEMBL ID: ENSG00000164934; HGNC ID: 24535 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.532265
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 5 / 62319 | 80 |  |
| fetus | 3 / 564012 | 5 |  |
| neonate | 2 / 31097 | 64 | |
| infant | 2 / 23620 | 84 | |
| juvenile | 7 / 55556 | 125 | |
| adult | 73 / 1939121 | 37 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 1 / 34366 | 29 | |
| chondrosarcoma | 4 / 82823 | 48 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 8 / 119369 | 67 | |
| germ cell tumor | 17 / 263845 | 64 | |
| glioma | 4 / 106883 | 37 | |
| head and neck tumor | 7 / 136302 | 51 | |
| kidney tumor | 1 / 68959 | 14 | |
| leukemia | 7 / 95842 | 73 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 112 / 3360307 | 33 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 5 / 104616 | 47 | |
| primitive neuroectodermal tumor of the CNS | 6 / 125680 | 47 | |
| prostate cancer | 1 / 102680 | 9 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 10 / 124949 | 80 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 0 / 29757 | 0 | |
| blood | 12 / 123478 | 97 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 33 / 1100989 | 29 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 14 / 215722 | 64 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 3 / 211054 | 14 | |
| heart | 0 / 89626 | 0 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 2 / 24145 | 82 | |
| liver | 11 / 207743 | 52 | |
| lung | 7 / 336974 | 20 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 1 / 91610 | 10 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 1 / 67052 | 14 | |
| muscle | 1 / 107715 | 9 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 14 / 214812 | 65 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 6 / 41328 | 145 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 12 / 280825 | 42 | |
| prostate | 4 / 189345 | 21 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 10 / 210574 | 47 | |
| spleen | 3 / 53952 | 55 | |
| stomach | 6 / 96619 | 62 | |
| testis | 27 / 330442 | 81 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 3 / 52413 | 57 | |
| umbilical cord | 2 / 13680 | 146 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 6 / 51780 | 115 | |
Microarray in - Probe name: CUST_15432_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.94 ± 0.5 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.02 ± 0.31 | |
| Basal Part of Pons | 5.93 ± 0.26 | |
| Cerebellar Cortex | 5.73 ± 0.36 | |
| Cerebellar Nuclei | 5.97 ± 0.63 | |
| Claustrum | 5.43 ± 0.47 | |
| Epithalamus | 5.92 ± 0.24 | |
| Frontal Lobe | 5.96 ± 0.33 | |
| Globus Pallidus | 6.27 ± 0.33 | |
| Hypothalamus | 6.16 ± 0.25 | |
| Insula | 5.78 ± 0.2 | |
| Limbic Lobe | 5.94 ± 0.39 | |
| Mesencephalon | 5.99 ± 0.41 | |
| Myelencephalon | 5.86 ± 0.46 | |
| Occipital Lobe | 5.91 ± 0.33 | |
| Parietal Lobe | 5.91 ± 0.39 | |
| Pontine Tegmentum | 5.92 ± 0.41 | |
| Striatum | 6.17 ± 0.37 | |
| Subthalamus | 5.67 ± 0.15 | |
| Temporal Lobe | 5.86 ± 0.39 | |
| Thalamus | 5.87 ± 0.4 | |
| White Matter | 6.73 ± 0.21 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Wdsof1 | CB | Cerebellum | 24.87 | |
| 27.6 | | |||
| Wdsof1 | CTX | Cerebral cortex | 76.6 | |
| 56.37 | | |||
| Wdsof1 | HIP | Hippocampal region | 50.71 | |
| 70.22 | | |||
| Wdsof1 | HPF | Hippocampal formation | 59.26 | |
| 65.15 | | |||
| Wdsof1 | HY | Hypothalamus | 37.89 | |
| 27.91 | | |||
| Wdsof1 | LSX | Lateral septal complex | 52.27 | |
| 37.37 | | |||
| Wdsof1 | MB | Midbrain | 35.21 | |
| 31.89 | | |||
| Wdsof1 | MY | Medulla | 30.75 | |
| 33.27 | | |||
| Wdsof1 | OLF | Olfactory bulb | 83.8 | |
| 71.69 | | |||
| Wdsof1 | P | Pons | 32.41 | |
| 30.52 | | |||
| Wdsof1 | PAL | Pallidum | 30.94 | |
| 25.91 | | |||
| Wdsof1 | RHP | Retrohippocampal region | 74.16 | |
| 59.35 | | |||
| Wdsof1 | sAMY | Striatum-like amygdalar nuclei | 42.52 | |
| 30.56 | | |||
| Wdsof1 | STR | Striatum | 78.11 | |
| 56.2 | | |||
| Wdsof1 | STRd | Striatum dorsal region | 78.3 | |
| 55.86 | | |||
| Wdsof1 | STRv | Striatum ventral region | 100 | |
| 81.24 | | |||
| Wdsof1 | TH | Thalamus | 42.7 | |
| 35.15 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00010672 | 14 | 231 | 244 | LATVLSGACDGEVR | Peptide Atlas |