Annotation Detail for THUMPD3
Basic Information Top
| Gene Symbol: | THUMPD3 ( DKFZp434F091 ) |
|---|---|
| Gene Full Name: | THUMP domain containing 3 |
| Band: | 3p25.3 |
| Quick Links | Entrez ID:25917; OMIM: NA; Uniprot ID:THUM3_HUMAN; ENSEMBL ID: ENSG00000134077; HGNC ID: 24493 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.443081
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 1 / 62319 | 16 | |
| fetus | 35 / 564012 | 62 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 1 / 23620 | 42 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 83 / 1939121 | 42 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 8 / 82823 | 96 | |
| colorectal tumor | 4 / 114246 | 35 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 15 / 263845 | 56 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 8 / 136302 | 58 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 2 / 95842 | 20 | |
| liver tumor | 3 / 96359 | 31 | |
| lung tumor | 3 / 103127 | 29 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 159 / 3360307 | 47 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 1 / 104616 | 9 |  |
| primitive neuroectodermal tumor of the CNS | 4 / 125680 | 31 | |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 2 / 124949 | 16 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 1 / 90257 | 11 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 4 / 40015 | 99 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 5 / 71655 | 69 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 45 / 1100989 | 40 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 9 / 149255 | 60 | |
| ear | 2 / 16212 | 123 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 14 / 211054 | 66 | |
| heart | 2 / 89626 | 22 | |
| intestine | 10 / 234472 | 42 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 5 / 24145 | 207 |  |
| liver | 9 / 207743 | 43 | |
| lung | 24 / 336974 | 71 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 7 / 91610 | 76 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 4 / 107715 | 37 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 3 / 102051 | 29 | |
| pancreas | 6 / 214812 | 27 | |
| parathyroid | 2 / 20539 | 97 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 8 / 280825 | 28 | |
| prostate | 13 / 189345 | 68 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 2 / 210574 | 9 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 3 / 96619 | 31 | |
| testis | 37 / 330442 | 111 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 5 / 47473 | 105 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 8 / 232878 | 34 | |
| vascular | 3 / 51780 | 57 | |
- Probe name: A_23_P212213
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.84 ± 0.35 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.08 ± 0.14 | |
| Basal Part of Pons | 8.15 ± 0.13 | |
| Cerebellar Cortex | 7.93 ± 0.2 | |
| Cerebellar Nuclei | 8.47 ± 0.23 | |
| Claustrum | 7.72 ± 0.47 | |
| Epithalamus | 8.17 ± 0.24 | |
| Frontal Lobe | 8.07 ± 0.22 | |
| Globus Pallidus | 8.5 ± 0.21 | |
| Hypothalamus | 8.28 ± 0.26 | |
| Insula | 8.04 ± 0.25 | |
| Limbic Lobe | 7.78 ± 0.33 | |
| Mesencephalon | 7.98 ± 0.27 | |
| Myelencephalon | 7.99 ± 0.32 | |
| Occipital Lobe | 7.62 ± 0.37 | |
| Parietal Lobe | 8.01 ± 0.26 | |
| Pontine Tegmentum | 8.03 ± 0.27 | |
| Striatum | 7.69 ± 0.25 | |
| Subthalamus | 8.15 ± 0.34 | |
| Temporal Lobe | 8.04 ± 0.28 | |
| Thalamus | 8.03 ± 0.24 | |
| White Matter | 8.79 ± 0.22 | |
Mouse Brain ISH 
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00079304 | 15 | 485 | 499 | TPQAFVHPSEQDGER | Peptide Atlas |