AutismKB 2.0

Annotation Detail for TIPARP


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Basic Information Top
Gene Symbol:TIPARP ( DKFZp434J214,DKFZp686N0351,DKFZp686P1838,FLJ40466,PARP7,pART14 )
Gene Full Name: TCDD-inducible poly(ADP-ribose) polymerase
Band: 3q25.31
Quick LinksEntrez ID:25976; OMIM: 612480; Uniprot ID:PARPT_HUMAN; ENSEMBL ID: ENSG00000163659; HGNC ID: 23696
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst1 / 6231916
fetus7 / 56401212
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult90 / 193912146
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor5 / 34366145
chondrosarcoma5 / 8282360
colorectal tumor8 / 11424670
esophageal tumor1 / 1729057
gastrointestinal tumor3 / 11936925
germ cell tumor10 / 26384537
glioma7 / 10688365
head and neck tumor7 / 13630251
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor11 / 96359114
lung tumor5 / 10312748
lymphoma6 / 7175583
non-neoplasia2 / 9725020
normal118 / 336030735
ovarian tumor1 / 7668213
pancreatic tumor3 / 10461628
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer1 / 1026809
retinoblastoma1 / 4635621
skin tumor3 / 12494924
soft tissue/muscle tissue tumor4 / 12519131
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood1 / 1234788
bone1 / 7165513
bone marrow1 / 4880120
brain35 / 110098931
cervix8 / 48171166
connective tissue11 / 14925573
ear0 / 162120 
embryonic tissue6 / 21572227
esophagus1 / 2020949
eye4 / 21105418
heart0 / 896260 
intestine13 / 23447255
kidney7 / 21177733
larynx1 / 2414541
liver22 / 207743105
lung17 / 33697450
lymph0 / 442700 
lymph node3 / 9161032
mammary gland6 / 15327139
mouth3 / 6705244
muscle0 / 1077150 
nerve0 / 157680 
ovary1 / 1020519
pancreas8 / 21481237
parathyroid13 / 20539632
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta1 / 2808253
prostate2 / 18934510
salivary gland0 / 201550 
skin11 / 21057452
spleen0 / 539520 
stomach2 / 9661920
testis26 / 33044278
thymus1 / 8113112
thyroid4 / 4747384
tonsil0 / 169990 
trachea6 / 52413114
umbilical cord0 / 136800 
uterus8 / 23287834
vascular3 / 5178057
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212665_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.8
Adipocyte6.55
AdrenalCortex76.65
Adrenalgland8.05
Amygdala6.65
Appendix6.75
AtrioventricularNode5.25
BDCA4+_DentriticCells8.25
Bonemarrow5.4
BronchialEpithelialCells83.3
CD105+_Endothelial5.65
CD14+_Monocytes8.35
CD19+_BCells(neg._sel.)6.3
CD33+_Myeloid81.3
CD34+19.3
CD4+_Tcells10.3
CD56+_NKCells38
CD71+_EarlyErythroid5.05
CD8+_Tcells10
CardiacMyocytes7.85
Caudatenucleus5.25
Cerebellum4.65
CerebellumPeduncles6.6
CiliaryGanglion4.45
CingulateCortex5.75
Colorectaladenocarcinoma16.45
DorsalRootGanglion4.6
FetalThyroid5.5
Fetalbrain6.15
Fetalliver5.15
Fetallung10.8
GlobusPallidus4
Heart7.35
Hypothalamus7.55
Kidney4.45
Leukemia_chronicMyelogenousK-56213.35
Leukemia_promyelocytic-HL-604.75
Leukemialymphoblastic(MOLT-4)4.3
Liver7.35
Lung6.55
Lymphnode5.05
Lymphoma_burkitts(Daudi)7.2
Lymphoma_burkitts(Raji)7.8
MedullaOblongata5.25
OccipitalLobe5.35
OlfactoryBulb15.75
Ovary8.85
Pancreas4.65
PancreaticIslet10.75
ParietalLobe6.15
Pituitary6.95
Placenta5.2
Pons5.45
PrefrontalCortex7.75
Prostate8.9
Salivarygland4.85
SkeletalMuscle6.6
Skin4.95
SmoothMuscle10.45
Spinalcord7.5
SubthalamicNucleus4.95
SuperiorCervicalGanglion6.8
TemporalLobe5.15
Testis14.2
TestisGermCell23.35
TestisIntersitial16.65
TestisLeydigCell18.25
TestisSeminiferousTubule14.6
Thalamus5.9
Thymus4.4
Thyroid7.75
Tongue6
Tonsil5.75
Trachea9.7
TrigeminalGanglion6
Uterus22.65
UterusCorpus5.6
WholeBlood17.15
Wholebrain5.05
colon7.25
pineal_day7.1
pineal_night7.26
retina7.275
small_intestine6.5
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_8796_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala6.49 ± 0.3
Basal Forebrain6.42 ± 0.37
Basal Part of Pons6.16 ± 0.27
Cerebellar Cortex6.4 ± 0.19
Cerebellar Nuclei6.31 ± 0.25
Claustrum6.17 ± 0.38
Epithalamus7.21 ± 0.46
Frontal Lobe6.4 ± 0.33
Globus Pallidus7.1 ± 0.4
Hypothalamus6.43 ± 0.42
Insula6.45 ± 0.28
Limbic Lobe6.43 ± 0.34
Mesencephalon6.46 ± 0.28
Myelencephalon6.46 ± 0.38
Occipital Lobe6.56 ± 0.33
Parietal Lobe6.31 ± 0.33
Pontine Tegmentum6.52 ± 0.43
Striatum6.88 ± 0.38
Subthalamus6.17 ± 0.43
Temporal Lobe6.28 ± 0.31
Thalamus6.67 ± 0.36
White Matter7.72 ± 0.3
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
TiparpPPons0.84
1.1
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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