AutismKB 2.0

Annotation Detail for ABP1


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Basic Information Top
Gene Symbol:ABP1 ( ABP,AOC1,DAO,DAO1,KAO )
Gene Full Name: amiloride binding protein 1 (amine oxidase (copper-containing))
Band: 7q34-q36
Quick LinksEntrez ID:26; OMIM: 104610; Uniprot ID:ABP1_HUMAN; ENSEMBL ID: ENSG00000002726; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus6 / 56401210
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult847 / 1939121436
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor18 / 114246157
esophageal tumor0 / 172900 
gastrointestinal tumor6 / 11936950
germ cell tumor2 / 2638457
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia2 / 9584220
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal1104 / 3360307328
ovarian tumor1 / 7668213
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood3 / 12347824
bone0 / 716550 
bone marrow0 / 488010 
brain12 / 110098910
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue0 / 2157220 
esophagus0 / 202090 
eye0 / 2110540 
heart0 / 896260 
intestine97 / 234472413
kidney185 / 211777873
larynx0 / 241450 
liver5 / 20774324
lung1 / 3369742
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth3 / 6705244
muscle2 / 10771518
nerve0 / 157680 
ovary1 / 1020519
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta810 / 2808252884
prostate40 / 189345211
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach6 / 9661962
testis9 / 33044227
thymus2 / 8113124
thyroid0 / 474730 
tonsil0 / 169990 
trachea1 / 5241319
umbilical cord0 / 136800 
uterus7 / 23287830
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 203559_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts105.25
Adipocyte6.55
AdrenalCortex7.7
Adrenalgland5.9
Amygdala6.85
Appendix6.9
AtrioventricularNode5.75
BDCA4+_DentriticCells6.85
Bonemarrow8.5
BronchialEpithelialCells6.45
CD105+_Endothelial6.4
CD14+_Monocytes6.95
CD19+_BCells(neg._sel.)6.5
CD33+_Myeloid7.95
CD34+8.05
CD4+_Tcells6.8
CD56+_NKCells7.6
CD71+_EarlyErythroid6.35
CD8+_Tcells5.65
CardiacMyocytes9.85
Caudatenucleus5.95
Cerebellum5.35
CerebellumPeduncles7.75
CiliaryGanglion5.2
CingulateCortex7.1
Colorectaladenocarcinoma39.55
DorsalRootGanglion5.7
FetalThyroid6.5
Fetalbrain6.6
Fetalliver5.9
Fetallung5.25
GlobusPallidus5
Heart9.45
Hypothalamus6.9
Kidney2033.85
Leukemia_chronicMyelogenousK-5625.85
Leukemia_promyelocytic-HL-605.85
Leukemialymphoblastic(MOLT-4)5.25
Liver10.45
Lung7.3
Lymphnode7.1
Lymphoma_burkitts(Daudi)8.65
Lymphoma_burkitts(Raji)9.95
MedullaOblongata6.05
OccipitalLobe5.75
OlfactoryBulb5.1
Ovary4.65
Pancreas27.05
PancreaticIslet7.15
ParietalLobe7.75
Pituitary8.45
Placenta10966.9
Pons6.45
PrefrontalCortex8
Prostate481.8
Salivarygland5.45
SkeletalMuscle11.85
Skin6.85
SmoothMuscle7.35
Spinalcord7.1
SubthalamicNucleus6.2
SuperiorCervicalGanglion8.85
TemporalLobe6.15
Testis5.7
TestisGermCell5.4
TestisIntersitial5.85
TestisLeydigCell6.75
TestisSeminiferousTubule5.7
Thalamus6.8
Thymus5.7
Thyroid8.1
Tongue6.75
Tonsil6.75
Trachea5.5
TrigeminalGanglion9.1
Uterus5.3
UterusCorpus6.5
WholeBlood7.2
Wholebrain5.35
colon845.55
pineal_day7.66
pineal_night7.74
retina7.925
small_intestine258
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P59452
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.34 ± 0.85
Basal Forebrain2.82 ± 0.39
Basal Part of Pons2.81 ± 0.86
Cerebellar Cortex2.66 ± 0.65
Cerebellar Nuclei3.04 ± 0.55
Claustrum3.81 ± 0.77
Epithalamus2.19 ± 0.89
Frontal Lobe2.93 ± 0.79
Globus Pallidus3.55 ± 1.12
Hypothalamus2.79 ± 0.55
Insula2.67 ± 0.69
Limbic Lobe2.97 ± 0.78
Mesencephalon3.08 ± 0.78
Myelencephalon3.07 ± 0.77
Occipital Lobe3.27 ± 0.99
Parietal Lobe3.06 ± 0.75
Pontine Tegmentum3.1 ± 0.76
Striatum3.45 ± 0.84
Subthalamus2.73 ± 0.65
Temporal Lobe2.8 ± 0.78
Thalamus3.27 ± 0.61
White Matter3.12 ± 0.57
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00848452 16 330 345 SSSGLQVLNVHFGGER Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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