Annotation Detail for TMEM98
Basic Information Top
| Gene Symbol: | TMEM98 ( DKFZp564K1964 ) |
|---|---|
| Gene Full Name: | transmembrane protein 98 |
| Band: | 17q11.2 |
| Quick Links | Entrez ID:26022; OMIM: NA; Uniprot ID:TMM98_HUMAN; ENSEMBL ID: ENSG00000006042; HGNC ID: 24529 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.3447
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 12 / 70761 | 169 |  |
| blastocyst | 2 / 62319 | 32 |  |
| fetus | 24 / 564012 | 42 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 3 / 55556 | 53 | |
| adult | 113 / 1939121 | 58 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 5 / 82823 | 60 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 0 / 263845 | 0 | |
| glioma | 1 / 106883 | 9 |  |
| head and neck tumor | 2 / 136302 | 14 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 4 / 95842 | 41 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 1 / 71755 | 13 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 180 / 3360307 | 53 | |
| ovarian tumor | 2 / 76682 | 26 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 15 / 125680 | 119 | |
| prostate cancer | 4 / 102680 | 38 | |
| retinoblastoma | 2 / 46356 | 43 | |
| skin tumor | 15 / 124949 | 120 | |
| soft tissue/muscle tissue tumor | 7 / 125191 | 55 | |
| uterine tumor | 6 / 90257 | 66 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 1 / 13106 | 76 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 1 / 29757 | 33 | |
| blood | 4 / 123478 | 32 | |
| bone | 3 / 71655 | 41 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 56 / 1100989 | 50 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 20 / 215722 | 92 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 36 / 211054 | 170 | |
| heart | 5 / 89626 | 55 | |
| intestine | 7 / 234472 | 29 | |
| kidney | 4 / 211777 | 18 | |
| larynx | 0 / 24145 | 0 | |
| liver | 0 / 207743 | 0 | |
| lung | 14 / 336974 | 41 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 0 / 91610 | 0 | |
| mammary gland | 2 / 153271 | 13 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 6 / 107715 | 55 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 5 / 102051 | 48 | |
| pancreas | 4 / 214812 | 18 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 2 / 41328 | 48 | |
| pituitary gland | 2 / 16585 | 120 | |
| placenta | 32 / 280825 | 113 | |
| prostate | 6 / 189345 | 31 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 19 / 210574 | 90 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 1 / 96619 | 10 | |
| testis | 3 / 330442 | 9 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 7 / 232878 | 30 | |
| vascular | 1 / 51780 | 19 | |
Microarray in - Probe name: A_23_P27035
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 7.86 ± 0.47 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.83 ± 0.49 | |
| Basal Part of Pons | 8.12 ± 0.65 | |
| Cerebellar Cortex | 7.98 ± 0.3 | |
| Cerebellar Nuclei | 9.4 ± 0.57 | |
| Claustrum | 7.73 ± 0.53 | |
| Epithalamus | 8.81 ± 0.43 | |
| Frontal Lobe | 8.3 ± 0.77 | |
| Globus Pallidus | 9.97 ± 0.34 | |
| Hypothalamus | 8.42 ± 0.3 | |
| Insula | 7.86 ± 0.34 | |
| Limbic Lobe | 7.79 ± 0.74 | |
| Mesencephalon | 8.46 ± 0.75 | |
| Myelencephalon | 8.44 ± 0.58 | |
| Occipital Lobe | 8.12 ± 0.7 | |
| Parietal Lobe | 8.07 ± 0.71 | |
| Pontine Tegmentum | 8.49 ± 0.61 | |
| Striatum | 9.2 ± 0.59 | |
| Subthalamus | 8.75 ± 0.68 | |
| Temporal Lobe | 8.05 ± 0.55 | |
| Thalamus | 8.76 ± 0.39 | |
| White Matter | 11 ± 0.45 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tmem98 | CB | Cerebellum | 54.17 | |
| 100 | | |||
| Tmem98 | CTX | Cerebral cortex | 100 | |
| 100 | | |||
| Tmem98 | HIP | Hippocampal region | 94.94 | |
| 100 | | |||
| Tmem98 | HPF | Hippocampal formation | 100 | |
| 100 | | |||
| Tmem98 | HY | Hypothalamus | 37.72 | |
| 38.13 | | |||
| Tmem98 | LSX | Lateral septal complex | 42.5 | |
| 38.96 | | |||
| Tmem98 | MB | Midbrain | 61.86 | |
| 73.89 | | |||
| Tmem98 | MY | Medulla | 67.13 | |
| 94.6 | | |||
| Tmem98 | OLF | Olfactory bulb | 100 | |
| 100 | | |||
| Tmem98 | P | Pons | 59.79 | |
| 75.14 | | |||
| Tmem98 | PAL | Pallidum | 43.16 | |
| 51.04 | | |||
| Tmem98 | RHP | Retrohippocampal region | 100 | |
| 100 | | |||
| Tmem98 | sAMY | Striatum-like amygdalar nuclei | 48.59 | |
| 54.24 | | |||
| Tmem98 | STR | Striatum | 68.82 | |
| 69.83 | | |||
| Tmem98 | STRd | Striatum dorsal region | 81.88 | |
| 84.14 | | |||
| Tmem98 | STRv | Striatum ventral region | 46.29 | |
| 46.06 | | |||
| Tmem98 | TH | Thalamus | 57.48 | |
| 69.65 | |