AutismKB 2.0

Annotation Detail for FAM169A


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Basic Information Top
Gene Symbol:FAM169A ( KIAA0888 )
Gene Full Name: family with sequence similarity 169, member A
Band: 5q13.3
Quick LinksEntrez ID:26049; OMIM: NA; Uniprot ID:F169A_HUMAN; ENSEMBL ID: ENSG00000198780; HGNC ID: 29138
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst4 / 6231964
fetus6 / 56401210
neonate0 / 310970 
infant1 / 2362042
juvenile0 / 555560 
adult40 / 193912120
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma1 / 1747557
breast (mammary gland) tumor0 / 941780 
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor3 / 26384511
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor1 / 9635910
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia7 / 9725071
normal67 / 336030719
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS1 / 1256807
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites0 / 400150 
bladder1 / 2975733
blood2 / 12347816
bone0 / 716550 
bone marrow1 / 4880120
brain31 / 110098928
cervix0 / 481710 
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue7 / 21572232
esophagus0 / 202090 
eye15 / 21105471
heart0 / 896260 
intestine1 / 2344724
kidney3 / 21177714
larynx0 / 241450 
liver3 / 20774314
lung3 / 3369748
lymph0 / 442700 
lymph node0 / 916100 
mammary gland0 / 1532710 
mouth0 / 670520 
muscle2 / 10771518
nerve0 / 157680 
ovary0 / 1020510 
pancreas4 / 21481218
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland1 / 1658560
placenta0 / 2808250 
prostate2 / 18934510
salivary gland0 / 201550 
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis11 / 33044233
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea2 / 5241338
umbilical cord0 / 136800 
uterus5 / 23287821
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213954_at
Cell line Expression level Expression bar
721_B_lymphoblasts9.2
Adipocyte7.6
AdrenalCortex9.75
Adrenalgland7.1
Amygdala16.75
Appendix9.05
AtrioventricularNode8
BDCA4+_DentriticCells7.9
Bonemarrow8.55
BronchialEpithelialCells7.45
CD105+_Endothelial8.1
CD14+_Monocytes8.3
CD19+_BCells(neg._sel.)8.45
CD33+_Myeloid9.45
CD34+9.85
CD4+_Tcells8.55
CD56+_NKCells11.5
CD71+_EarlyErythroid7.5
CD8+_Tcells7.8
CardiacMyocytes12.5
Caudatenucleus7.25
Cerebellum6.6
CerebellumPeduncles10.8
CiliaryGanglion6.6
CingulateCortex12.5
Colorectaladenocarcinoma8.1
DorsalRootGanglion6.95
FetalThyroid7.95
Fetalbrain7.95
Fetalliver6.95
Fetallung5
GlobusPallidus8.65
Heart12.05
Hypothalamus12.75
Kidney7
Leukemia_chronicMyelogenousK-5627.25
Leukemia_promyelocytic-HL-607
Leukemialymphoblastic(MOLT-4)6.35
Liver11.45
Lung7.85
Lymphnode6.2
Lymphoma_burkitts(Daudi)10.4
Lymphoma_burkitts(Raji)12
MedullaOblongata7.35
OccipitalLobe11
OlfactoryBulb6.25
Ovary5.65
Pancreas6.55
PancreaticIslet8.65
ParietalLobe8.9
Pituitary19.3
Placenta6.75
Pons8.15
PrefrontalCortex47.8
Prostate9.2
Salivarygland6.65
SkeletalMuscle11.9
Skin7.95
SmoothMuscle8.6
Spinalcord8.5
SubthalamicNucleus19.55
SuperiorCervicalGanglion11.2
TemporalLobe10.8
Testis6.65
TestisGermCell6.55
TestisIntersitial6.9
TestisLeydigCell8.2
TestisSeminiferousTubule6.9
Thalamus9.55
Thymus7.85
Thyroid9.6
Tongue8.55
Tonsil7.85
Trachea6.35
TrigeminalGanglion12.45
Uterus5.65
UterusCorpus7.65
WholeBlood8.05
Wholebrain10.55
colon7.5
pineal_day362.64
pineal_night455.46
retina10.175
small_intestine6.6
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_23_P423074
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala10.35 ± 0.18
Basal Forebrain10.42 ± 0.23
Basal Part of Pons10.49 ± 0.24
Cerebellar Cortex10.36 ± 0.23
Cerebellar Nuclei10.33 ± 0.31
Claustrum10.66 ± 0.32
Epithalamus10.54 ± 0.2
Frontal Lobe10.43 ± 0.29
Globus Pallidus10.07 ± 0.24
Hypothalamus10.76 ± 0.33
Insula10.47 ± 0.27
Limbic Lobe10.45 ± 0.34
Mesencephalon10.46 ± 0.29
Myelencephalon10.48 ± 0.28
Occipital Lobe10.75 ± 0.21
Parietal Lobe10.61 ± 0.23
Pontine Tegmentum10.46 ± 0.31
Striatum10.21 ± 0.33
Subthalamus10.6 ± 0.24
Temporal Lobe10.49 ± 0.24
Thalamus10.62 ± 0.24
White Matter10.14 ± 0.43
Mouse Brain ISH
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00131850 22 193 214 DFGLHMLEDFVDSFTEDALGLR Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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