AutismKB 2.0

Annotation Detail for RAI14


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Basic Information Top
Gene Symbol:RAI14 ( DKFZp564G013,KIAA1334,NORPEG,RAI13 )
Gene Full Name: retinoic acid induced 14
Band: 5p13.2
Quick LinksEntrez ID:26064; OMIM: 606586; Uniprot ID:RAI14_HUMAN; ENSEMBL ID: ENSG00000039560; HGNC ID: 14873
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body15 / 70761211
blastocyst9 / 62319144
fetus67 / 564012118
neonate8 / 31097257
infant2 / 2362084
juvenile5 / 5555689
adult152 / 193912178
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma1 / 1747557
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma12 / 82823144
colorectal tumor5 / 11424643
esophageal tumor1 / 1729057
gastrointestinal tumor14 / 119369117
germ cell tumor35 / 263845132
glioma1 / 1068839
head and neck tumor2 / 13630214
kidney tumor6 / 6895987
leukemia1 / 9584210
liver tumor10 / 96359103
lung tumor6 / 10312758
lymphoma1 / 7175513
non-neoplasia5 / 9725051
normal261 / 336030777
ovarian tumor8 / 76682104
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS4 / 12568031
prostate cancer1 / 1026809
retinoblastoma1 / 4635621
skin tumor5 / 12494940
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor9 / 9025799
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland2 / 3319760
ascites3 / 4001574
bladder5 / 29757168
blood1 / 1234788
bone13 / 71655181
bone marrow4 / 4880181
brain40 / 110098936
cervix0 / 481710 
connective tissue10 / 14925566
ear3 / 16212185
embryonic tissue25 / 215722115
esophagus1 / 2020949
eye6 / 21105428
heart4 / 8962644
intestine12 / 23447251
kidney25 / 211777118
larynx1 / 2414541
liver18 / 20774386
lung19 / 33697456
lymph0 / 442700 
lymph node1 / 9161010
mammary gland3 / 15327119
mouth2 / 6705229
muscle4 / 10771537
nerve2 / 15768126
ovary9 / 10205188
pancreas7 / 21481232
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta44 / 280825156
prostate5 / 18934526
salivary gland0 / 201550 
skin22 / 210574104
spleen4 / 5395274
stomach10 / 96619103
testis62 / 330442187
thymus2 / 8113124
thyroid2 / 4747342
tonsil0 / 169990 
trachea5 / 5241395
umbilical cord3 / 13680219
uterus24 / 232878103
vascular8 / 51780154
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 202052_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts5.6
Adipocyte8.45
AdrenalCortex5.45
Adrenalgland4.2
Amygdala4.85
Appendix5.1
AtrioventricularNode3.8
BDCA4+_DentriticCells4.9
Bonemarrow4.95
BronchialEpithelialCells58.7
CD105+_Endothelial5.05
CD14+_Monocytes4.95
CD19+_BCells(neg._sel.)5.1
CD33+_Myeloid5.85
CD34+5.8
CD4+_Tcells4.95
CD56+_NKCells5.35
CD71+_EarlyErythroid4.45
CD8+_Tcells4.4
CardiacMyocytes123.05
Caudatenucleus4.35
Cerebellum3.95
CerebellumPeduncles5.6
CiliaryGanglion4.55
CingulateCortex5
Colorectaladenocarcinoma4.85
DorsalRootGanglion7
FetalThyroid5.25
Fetalbrain5.45
Fetalliver6.9
Fetallung30.4
GlobusPallidus3.6
Heart7.1
Hypothalamus5.8
Kidney4.25
Leukemia_chronicMyelogenousK-5625.7
Leukemia_promyelocytic-HL-604.05
Leukemialymphoblastic(MOLT-4)3.75
Liver7.35
Lung5.65
Lymphnode16.25
Lymphoma_burkitts(Daudi)6.2
Lymphoma_burkitts(Raji)6.8
MedullaOblongata4.3
OccipitalLobe4.5
OlfactoryBulb58.55
Ovary4.15
Pancreas4.15
PancreaticIslet6
ParietalLobe5.3
Pituitary5.5
Placenta160.9
Pons4.9
PrefrontalCortex5.7
Prostate5.75
Salivarygland4.25
SkeletalMuscle6.5
Skin5
SmoothMuscle371.95
Spinalcord11.75
SubthalamicNucleus4.4
SuperiorCervicalGanglion6.15
TemporalLobe4.5
Testis4.35
TestisGermCell4.95
TestisIntersitial4.45
TestisLeydigCell6.1
TestisSeminiferousTubule5
Thalamus5.05
Thymus3.65
Thyroid7.75
Tongue4.85
Tonsil4.6
Trachea8.9
TrigeminalGanglion5.4
Uterus166.95
UterusCorpus29.4
WholeBlood5
Wholebrain3.85
colon5.05
pineal_day6.16
pineal_night5.74
retina7.9
small_intestine4.7
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_37_PI416408490
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.33 ± 0.75
Basal Forebrain3.97 ± 0.49
Basal Part of Pons3.01 ± 0.74
Cerebellar Cortex3.36 ± 0.69
Cerebellar Nuclei3.93 ± 0.84
Claustrum3.42 ± 0.6
Epithalamus3.89 ± 0.36
Frontal Lobe3.24 ± 0.77
Globus Pallidus5.03 ± 0.64
Hypothalamus2.85 ± 0.56
Insula3.03 ± 0.85
Limbic Lobe2.99 ± 0.7
Mesencephalon3.5 ± 0.88
Myelencephalon3.42 ± 0.74
Occipital Lobe3.33 ± 0.94
Parietal Lobe3.19 ± 0.73
Pontine Tegmentum3.43 ± 0.7
Striatum3.79 ± 0.78
Subthalamus3.39 ± 0.12
Temporal Lobe3.17 ± 0.66
Thalamus4.01 ± 0.6
White Matter5.31 ± 0.54
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Rai14CBCerebellum4.13
5.94
Rai14CTXCerebral cortex11.06
9.21
Rai14HIPHippocampal region1.53
1.67
Rai14HPFHippocampal formation8.53
8.89
Rai14HYHypothalamus2.27
2.36
Rai14LSXLateral septal complex2.3
2.34
Rai14MBMidbrain3.02
3.16
Rai14MYMedulla1.47
1.66
Rai14OLFOlfactory bulb12.18
9.7
Rai14PPons1.02
1.05
Rai14PALPallidum0.96
0.74
Rai14RHPRetrohippocampal region19.71
18.28
Rai14sAMYStriatum-like amygdalar nuclei2.98
2.09
Rai14STRStriatum2.82
2.71
Rai14STRdStriatum dorsal region2.82
2.9
Rai14STRvStriatum ventral region1.88
1.75
Rai14THThalamus2.25
2.65
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00001246 11 110 120 CPAESVDSSGK Peptide Atlas
RAI14_HUMAN_1 9 1 9 MKSLKAKFR PRIDE

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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