Annotation Detail for POLDIP2
Basic Information Top
| Gene Symbol: | POLDIP2 ( DKFZp586F1524,PDIP38,POLD4 ) |
|---|---|
| Gene Full Name: | polymerase (DNA-directed), delta interacting protein 2 |
| Band: | 17q11.2 |
| Quick Links | Entrez ID:26073; OMIM: 611519; Uniprot ID:PDIP2_HUMAN; ENSEMBL ID: ; HGNC ID: 23781 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.241543
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 6 / 70761 | 84 |  |
| blastocyst | 4 / 62319 | 64 | |
| fetus | 44 / 564012 | 78 | |
| neonate | 4 / 31097 | 128 | |
| infant | 3 / 23620 | 127 | |
| juvenile | 8 / 55556 | 143 | |
| adult | 221 / 1939121 | 113 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 5 / 12794 | 390 |  |
| bladder carcinoma | 1 / 17475 | 57 | |
| breast (mammary gland) tumor | 19 / 94178 | 201 | |
| cervical tumor | 8 / 34366 | 232 | |
| chondrosarcoma | 11 / 82823 | 132 | |
| colorectal tumor | 8 / 114246 | 70 | |
| esophageal tumor | 1 / 17290 | 57 | |
| gastrointestinal tumor | 23 / 119369 | 192 | |
| germ cell tumor | 33 / 263845 | 125 | |
| glioma | 24 / 106883 | 224 | |
| head and neck tumor | 20 / 136302 | 146 | |
| kidney tumor | 8 / 68959 | 116 | |
| leukemia | 15 / 95842 | 156 | |
| liver tumor | 12 / 96359 | 124 | |
| lung tumor | 13 / 103127 | 126 | |
| lymphoma | 10 / 71755 | 139 | |
| non-neoplasia | 7 / 97250 | 71 | |
| normal | 286 / 3360307 | 85 | |
| ovarian tumor | 22 / 76682 | 286 | |
| pancreatic tumor | 27 / 104616 | 258 | |
| primitive neuroectodermal tumor of the CNS | 22 / 125680 | 175 | |
| prostate cancer | 13 / 102680 | 126 | |
| retinoblastoma | 4 / 46356 | 86 | |
| skin tumor | 20 / 124949 | 160 | |
| soft tissue/muscle tissue tumor | 18 / 125191 | 143 | |
| uterine tumor | 10 / 90257 | 110 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 11 / 33197 | 331 | |
| ascites | 12 / 40015 | 299 | |
| bladder | 5 / 29757 | 168 | |
| blood | 15 / 123478 | 121 | |
| bone | 10 / 71655 | 139 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 110 / 1100989 | 99 | |
| cervix | 12 / 48171 | 249 | |
| connective tissue | 6 / 149255 | 40 |  |
| ear | 1 / 16212 | 61 | |
| embryonic tissue | 19 / 215722 | 88 | |
| esophagus | 1 / 20209 | 49 | |
| eye | 23 / 211054 | 108 | |
| heart | 7 / 89626 | 78 | |
| intestine | 21 / 234472 | 89 | |
| kidney | 21 / 211777 | 99 | |
| larynx | 7 / 24145 | 289 | |
| liver | 16 / 207743 | 77 | |
| lung | 34 / 336974 | 100 | |
| lymph | 2 / 44270 | 45 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 20 / 153271 | 130 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 15 / 107715 | 139 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 27 / 102051 | 264 | |
| pancreas | 36 / 214812 | 167 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 35 / 280825 | 124 | |
| prostate | 17 / 189345 | 89 | |
| salivary gland | 6 / 20155 | 297 | |
| skin | 36 / 210574 | 170 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 5 / 96619 | 51 | |
| testis | 31 / 330442 | 93 | |
| thymus | 3 / 81131 | 36 | |
| thyroid | 5 / 47473 | 105 | |
| tonsil | 1 / 16999 | 58 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 2 / 13680 | 146 | |
| uterus | 30 / 232878 | 128 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: A_24_P142442
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 9.25 ± 0.28 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 9.38 ± 0.12 | |
| Basal Part of Pons | 9.74 ± 0.12 | |
| Cerebellar Cortex | 9.46 ± 0.13 | |
| Cerebellar Nuclei | 9.69 ± 0.22 | |
| Claustrum | 9.13 ± 0.24 | |
| Epithalamus | 9.22 ± 0.15 | |
| Frontal Lobe | 9.58 ± 0.23 | |
| Globus Pallidus | 9.3 ± 0.23 | |
| Hypothalamus | 9.39 ± 0.16 | |
| Insula | 9.56 ± 0.19 | |
| Limbic Lobe | 9.42 ± 0.29 | |
| Mesencephalon | 9.41 ± 0.3 | |
| Myelencephalon | 9.46 ± 0.28 | |
| Occipital Lobe | 9.44 ± 0.23 | |
| Parietal Lobe | 9.56 ± 0.28 | |
| Pontine Tegmentum | 9.45 ± 0.25 | |
| Striatum | 9.32 ± 0.23 | |
| Subthalamus | 9.72 ± 0.09 | |
| Temporal Lobe | 9.5 ± 0.22 | |
| Thalamus | 9.6 ± 0.22 | |
| White Matter | 8.51 ± 0.28 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Poldip2 | CB | Cerebellum | 17.58 | |
| 29.46 | | |||
| Poldip2 | CTX | Cerebral cortex | 49.75 | |
| 43.84 | | |||
| Poldip2 | HIP | Hippocampal region | 31.77 | |
| 43.92 | | |||
| Poldip2 | HPF | Hippocampal formation | 35 | |
| 41.72 | | |||
| Poldip2 | HY | Hypothalamus | 6.53 | |
| 5.75 | | |||
| Poldip2 | LSX | Lateral septal complex | 9.65 | |
| 7.43 | | |||
| Poldip2 | MB | Midbrain | 16.33 | |
| 17.6 | | |||
| Poldip2 | MY | Medulla | 17.5 | |
| 26.5 | | |||
| Poldip2 | OLF | Olfactory bulb | 25.72 | |
| 23.74 | | |||
| Poldip2 | P | Pons | 14.2 | |
| 19.53 | | |||
| Poldip2 | PAL | Pallidum | 16.39 | |
| 17.06 | | |||
| Poldip2 | RHP | Retrohippocampal region | 40.12 | |
| 39.2 | | |||
| Poldip2 | sAMY | Striatum-like amygdalar nuclei | 10.77 | |
| 8.54 | | |||
| Poldip2 | STR | Striatum | 10.02 | |
| 8.59 | | |||
| Poldip2 | STRd | Striatum dorsal region | 7.69 | |
| 7.25 | | |||
| Poldip2 | STRv | Striatum ventral region | 17.56 | |
| 13.02 | | |||
| Poldip2 | TH | Thalamus | 14.05 | |
| 13.59 | |