AutismKB 2.0

Annotation Detail for TBC1D29


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Basic Information Top
Gene Symbol:TBC1D29 ( DKFZp434O047 )
Gene Full Name: TBC1 domain family, member 29
Band: 17q11.2
Quick LinksEntrez ID:26083; OMIM: NA; Uniprot ID:TBC29_HUMAN; ENSEMBL ID: ENSG00000197689; HGNC ID: 24509
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
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  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 208008_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.8
Adipocyte5.85
AdrenalCortex6.3
Adrenalgland4.85
Amygdala6.2
Appendix6.6
AtrioventricularNode6.2
BDCA4+_DentriticCells6.1
Bonemarrow5.7
BronchialEpithelialCells5.75
CD105+_Endothelial5.75
CD14+_Monocytes6.3
CD19+_BCells(neg._sel.)6.2
CD33+_Myeloid7.2
CD34+7.15
CD4+_Tcells6.45
CD56+_NKCells5.5
CD71+_EarlyErythroid5.9
CD8+_Tcells5.45
CardiacMyocytes7.35
Caudatenucleus5.25
Cerebellum4.75
CerebellumPeduncles6.6
CiliaryGanglion4.05
CingulateCortex8.8
Colorectaladenocarcinoma7.1
DorsalRootGanglion8.95
FetalThyroid5.65
Fetalbrain5.9
Fetalliver5.05
Fetallung4.65
GlobusPallidus4.7
Heart7.5
Hypothalamus6.25
Kidney4.85
Leukemia_chronicMyelogenousK-5625.7
Leukemia_promyelocytic-HL-607.2
Leukemialymphoblastic(MOLT-4)4.7
Liver8.45
Lung6.5
Lymphnode5.1
Lymphoma_burkitts(Daudi)7.4
Lymphoma_burkitts(Raji)8.1
MedullaOblongata6.1
OccipitalLobe5.3
OlfactoryBulb5.1
Ovary3.95
Pancreas4.7
PancreaticIslet6.2
ParietalLobe9.95
Pituitary6.7
Placenta6.05
Pons5.85
PrefrontalCortex7.35
Prostate6.95
Salivarygland4.65
SkeletalMuscle7.3
Skin4.4
SmoothMuscle6.65
Spinalcord6.25
SubthalamicNucleus5.3
SuperiorCervicalGanglion6.5
TemporalLobe5.35
Testis6.2
TestisGermCell4.8
TestisIntersitial5.05
TestisLeydigCell6.25
TestisSeminiferousTubule5.05
Thalamus5.9
Thymus4.7
Thyroid7.45
Tongue5.65
Tonsil5.7
Trachea4.85
TrigeminalGanglion8.6
Uterus4.9
UterusCorpus5.25
WholeBlood6.4
Wholebrain5.05
colon5.9
pineal_day7.16
pineal_night7
retina7.1
small_intestine5.65
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6305_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.08 ± 0.96
Basal Forebrain1.81 ± 0.32
Basal Part of Pons1.44 ± 0.46
Cerebellar Cortex1.5 ± 0.63
Cerebellar Nuclei2.05 ± 0.8
Claustrum2.63 ± 0.85
Epithalamus1.38 ± 0.74
Frontal Lobe1.56 ± 0.64
Globus Pallidus2.42 ± 0.6
Hypothalamus1.71 ± 0.66
Insula1.63 ± 0.45
Limbic Lobe1.75 ± 0.7
Mesencephalon1.89 ± 0.62
Myelencephalon1.76 ± 0.66
Occipital Lobe1.82 ± 0.59
Parietal Lobe1.78 ± 0.73
Pontine Tegmentum1.81 ± 0.72
Striatum1.98 ± 0.6
Subthalamus1.85 ± 0.69
Temporal Lobe1.62 ± 0.63
Thalamus1.71 ± 0.6
White Matter2.38 ± 0.77
Mouse Brain ISH
Peptide Top

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  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018