Annotation Detail for DCAF4
Basic Information Top
| Gene Symbol: | DCAF4 ( DKFZp434K114,MGC20547,MGC46524,WDR21,WDR21A ) |
|---|---|
| Gene Full Name: | DDB1 and CUL4 associated factor 4 |
| Band: | 14q24.2 |
| Quick Links | Entrez ID:26094; OMIM: NA; Uniprot ID:DCAF4_HUMAN; ENSEMBL ID: ENSG00000119599; HGNC ID: 20229 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.331491
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 24 / 564012 | 42 | |
| neonate | 3 / 31097 | 96 |  |
| infant | 2 / 23620 | 84 | |
| juvenile | 1 / 55556 | 17 | |
| adult | 51 / 1939121 | 26 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 5 / 94178 | 53 | |
| cervical tumor | 3 / 34366 | 87 | |
| chondrosarcoma | 1 / 82823 | 12 | |
| colorectal tumor | 1 / 114246 | 8 |  |
| esophageal tumor | 2 / 17290 | 115 | |
| gastrointestinal tumor | 7 / 119369 | 58 | |
| germ cell tumor | 15 / 263845 | 56 | |
| glioma | 6 / 106883 | 56 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 5 / 95842 | 52 | |
| liver tumor | 4 / 96359 | 41 | |
| lung tumor | 1 / 103127 | 9 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 111 / 3360307 | 33 | |
| ovarian tumor | 6 / 76682 | 78 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 12 / 125680 | 95 | |
| prostate cancer | 2 / 102680 | 19 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 7 / 124949 | 56 | |
| soft tissue/muscle tissue tumor | 6 / 125191 | 47 | |
| uterine tumor | 5 / 90257 | 55 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 1 / 40015 | 24 | |
| bladder | 0 / 29757 | 0 | |
| blood | 7 / 123478 | 56 | |
| bone | 0 / 71655 | 0 | |
| bone marrow | 1 / 48801 | 20 | |
| brain | 55 / 1100989 | 49 | |
| cervix | 3 / 48171 | 62 | |
| connective tissue | 5 / 149255 | 33 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 2 / 215722 | 9 | |
| esophagus | 2 / 20209 | 98 | |
| eye | 4 / 211054 | 18 | |
| heart | 2 / 89626 | 22 | |
| intestine | 5 / 234472 | 21 | |
| kidney | 10 / 211777 | 47 | |
| larynx | 0 / 24145 | 0 | |
| liver | 5 / 207743 | 24 | |
| lung | 5 / 336974 | 14 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 3 / 91610 | 32 | |
| mammary gland | 5 / 153271 | 32 | |
| mouth | 2 / 67052 | 29 | |
| muscle | 3 / 107715 | 27 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 6 / 102051 | 58 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 5 / 280825 | 17 | |
| prostate | 3 / 189345 | 15 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 11 / 210574 | 52 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 4 / 96619 | 41 | |
| testis | 10 / 330442 | 30 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 2 / 47473 | 42 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 11 / 232878 | 47 | |
| vascular | 3 / 51780 | 57 | |
Microarray in - Probe name: A_24_P241318
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.87 ± 0.52 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 6.06 ± 0.35 | |
| Basal Part of Pons | 6.56 ± 0.36 | |
| Cerebellar Cortex | 5.93 ± 0.23 | |
| Cerebellar Nuclei | 6.29 ± 0.5 | |
| Claustrum | 6.21 ± 0.52 | |
| Epithalamus | 5.95 ± 0.21 | |
| Frontal Lobe | 6.43 ± 0.4 | |
| Globus Pallidus | 5.71 ± 0.57 | |
| Hypothalamus | 7.26 ± 0.76 | |
| Insula | 6.66 ± 0.37 | |
| Limbic Lobe | 6.23 ± 0.55 | |
| Mesencephalon | 6.13 ± 0.47 | |
| Myelencephalon | 6.18 ± 0.6 | |
| Occipital Lobe | 5.7 ± 0.68 | |
| Parietal Lobe | 6.25 ± 0.53 | |
| Pontine Tegmentum | 6.31 ± 0.6 | |
| Striatum | 5.67 ± 0.69 | |
| Subthalamus | 6.73 ± 0.29 | |
| Temporal Lobe | 6.53 ± 0.45 | |
| Thalamus | 5.99 ± 0.43 | |
| White Matter | 5.83 ± 0.47 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Wdr21 | CB | Cerebellum | 12.57 | |
| 9.59 | | |||
| Wdr21 | CTX | Cerebral cortex | 10.14 | |
| 5.67 | | |||
| Wdr21 | HIP | Hippocampal region | 12.9 | |
| 6.59 | | |||
| Wdr21 | HPF | Hippocampal formation | 13.85 | |
| 8.09 | | |||
| Wdr21 | HY | Hypothalamus | 4.25 | |
| 2.21 | | |||
| Wdr21 | LSX | Lateral septal complex | 3.92 | |
| 1.94 | | |||
| Wdr21 | MB | Midbrain | 2.42 | |
| 1.74 | | |||
| Wdr21 | MY | Medulla | 10.8 | |
| 8.4 | | |||
| Wdr21 | OLF | Olfactory bulb | 11.54 | |
| 5.93 | | |||
| Wdr21 | P | Pons | 5.23 | |
| 3.38 | | |||
| Wdr21 | PAL | Pallidum | 4.18 | |
| 2.68 | | |||
| Wdr21 | RHP | Retrohippocampal region | 15.95 | |
| 10.28 | | |||
| Wdr21 | sAMY | Striatum-like amygdalar nuclei | 6.39 | |
| 3.39 | | |||
| Wdr21 | STR | Striatum | 6.17 | |
| 3.02 | | |||
| Wdr21 | STRd | Striatum dorsal region | 6.3 | |
| 3.16 | | |||
| Wdr21 | STRv | Striatum ventral region | 6.94 | |
| 2.92 | | |||
| Wdr21 | TH | Thalamus | 2.97 | |
| 1.58 | |