AutismKB 2.0

Annotation Detail for TCTN3


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:TCTN3 ( C10orf61,DKFZp564D116,TECT3 )
Gene Full Name: tectonic family member 3
Band: 10q24.1
Quick LinksEntrez ID:26123; OMIM: NA; Uniprot ID:TECT3_HUMAN; ENSEMBL ID: ENSG00000119977; HGNC ID: 24519
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body3 / 7076142
blastocyst1 / 6231916
fetus54 / 56401295
neonate3 / 3109796
infant4 / 23620169
juvenile2 / 5555635
adult191 / 193912198
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor2 / 12794156
bladder carcinoma1 / 1747557
breast (mammary gland) tumor8 / 9417884
cervical tumor4 / 34366116
chondrosarcoma14 / 82823169
colorectal tumor9 / 11424678
esophageal tumor1 / 1729057
gastrointestinal tumor9 / 11936975
germ cell tumor41 / 263845155
glioma11 / 106883102
head and neck tumor23 / 136302168
kidney tumor10 / 68959145
leukemia1 / 9584210
liver tumor6 / 9635962
lung tumor7 / 10312767
lymphoma14 / 71755195
non-neoplasia8 / 9725082
normal342 / 3360307101
ovarian tumor8 / 76682104
pancreatic tumor4 / 10461638
primitive neuroectodermal tumor of the CNS17 / 125680135
prostate cancer4 / 10268038
retinoblastoma3 / 4635664
skin tumor14 / 124949112
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor8 / 9025788
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland5 / 33197150
ascites1 / 4001524
bladder3 / 29757100
blood8 / 12347864
bone6 / 7165583
bone marrow6 / 48801122
brain94 / 110098985
cervix7 / 48171145
connective tissue20 / 149255133
ear1 / 1621261
embryonic tissue16 / 21572274
esophagus2 / 2020998
eye8 / 21105437
heart8 / 8962689
intestine27 / 234472115
kidney28 / 211777132
larynx4 / 24145165
liver9 / 20774343
lung25 / 33697474
lymph7 / 44270158
lymph node2 / 9161021
mammary gland17 / 153271110
mouth12 / 67052178
muscle7 / 10771564
nerve0 / 157680 
ovary9 / 10205188
pancreas10 / 21481246
parathyroid5 / 20539243
pharynx5 / 41328120
pituitary gland0 / 165850 
placenta24 / 28082585
prostate25 / 189345132
salivary gland1 / 2015549
skin24 / 210574113
spleen8 / 53952148
stomach9 / 9661993
testis51 / 330442154
thymus7 / 8113186
thyroid11 / 47473231
tonsil1 / 1699958
trachea1 / 5241319
umbilical cord0 / 136800 
uterus28 / 232878120
vascular8 / 51780154
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 212123_at
Cell line Expression level Expression bar
721_B_lymphoblasts64.9
Adipocyte48.85
AdrenalCortex67.25
Adrenalgland87.95
Amygdala32.2
Appendix55.95
AtrioventricularNode37.8
BDCA4+_DentriticCells32.3
Bonemarrow61.1
BronchialEpithelialCells48.75
CD105+_Endothelial33.2
CD14+_Monocytes13.65
CD19+_BCells(neg._sel.)42.7
CD33+_Myeloid39.25
CD34+29.8
CD4+_Tcells45.25
CD56+_NKCells45.35
CD71+_EarlyErythroid33.4
CD8+_Tcells33.35
CardiacMyocytes60.4
Caudatenucleus58.8
Cerebellum83.35
CerebellumPeduncles55.75
CiliaryGanglion41.1
CingulateCortex51.1
Colorectaladenocarcinoma16.4
DorsalRootGanglion37.95
FetalThyroid86.3
Fetalbrain49.45
Fetalliver63.4
Fetallung44.35
GlobusPallidus32
Heart63.1
Hypothalamus55.75
Kidney66.95
Leukemia_chronicMyelogenousK-56246.1
Leukemia_promyelocytic-HL-6056.95
Leukemialymphoblastic(MOLT-4)42.1
Liver64.6
Lung48.4
Lymphnode43.35
Lymphoma_burkitts(Daudi)71.2
Lymphoma_burkitts(Raji)43.8
MedullaOblongata50.2
OccipitalLobe37.4
OlfactoryBulb50.35
Ovary49.75
Pancreas39.45
PancreaticIslet57.4
ParietalLobe59.55
Pituitary116.4
Placenta52.45
Pons47.85
PrefrontalCortex62.4
Prostate58.55
Salivarygland58.65
SkeletalMuscle67
Skin65.45
SmoothMuscle60.05
Spinalcord76.35
SubthalamicNucleus41.95
SuperiorCervicalGanglion81.4
TemporalLobe43.65
Testis81.3
TestisGermCell34.5
TestisIntersitial49.85
TestisLeydigCell54.75
TestisSeminiferousTubule46.65
Thalamus50.3
Thymus42.5
Thyroid57.4
Tongue48.1
Tonsil47.1
Trachea42.1
TrigeminalGanglion57.5
Uterus40.6
UterusCorpus84.65
WholeBlood28.45
Wholebrain38.15
colon29.45
pineal_day68.56
pineal_night67.78
retina60.825
small_intestine40.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P2738
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.14 ± 0.29
Basal Forebrain7.31 ± 0.15
Basal Part of Pons7.45 ± 0.21
Cerebellar Cortex7.09 ± 0.14
Cerebellar Nuclei7.31 ± 0.14
Claustrum6.88 ± 0.5
Epithalamus8.07 ± 0.5
Frontal Lobe7.4 ± 0.28
Globus Pallidus7.8 ± 0.26
Hypothalamus7.52 ± 0.26
Insula7.42 ± 0.2
Limbic Lobe7.18 ± 0.28
Mesencephalon7.36 ± 0.37
Myelencephalon7.33 ± 0.37
Occipital Lobe7.2 ± 0.32
Parietal Lobe7.31 ± 0.3
Pontine Tegmentum7.33 ± 0.31
Striatum7.86 ± 0.24
Subthalamus7.47 ± 0.15
Temporal Lobe7.31 ± 0.26
Thalamus7.41 ± 0.28
White Matter6.65 ± 0.12
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
4930521E07RikCBCerebellum8.55
6.54
4930521E07RikCTXCerebral cortex100
61.45
4930521E07RikHIPHippocampal region47.43
38.69
4930521E07RikHPFHippocampal formation65.42
43.7
4930521E07RikHYHypothalamus25.6
7.92
4930521E07RikLSXLateral septal complex50.79
15.44
4930521E07RikMBMidbrain18.75
7.5
4930521E07RikMYMedulla33.45
15.28
4930521E07RikOLFOlfactory bulb88.93
45.8
4930521E07RikPPons26.9
11.41
4930521E07RikPALPallidum33.76
12.92
4930521E07RikRHPRetrohippocampal region99.81
53.33
4930521E07RiksAMYStriatum-like amygdalar nuclei68.6
22.29
4930521E07RikSTRStriatum94.17
37.57
4930521E07RikSTRdStriatum dorsal region100
43.05
4930521E07RikSTRvStriatum ventral region99.96
39.96
4930521E07RikTHThalamus56.22
22.54
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved