AutismKB 2.0

Annotation Detail for C10orf12


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Basic Information Top
Gene Symbol:C10orf12 ( DKFZp564P1916,FLJ13022 )
Gene Full Name: chromosome 10 open reading frame 12
Band: 10q24.1
Quick LinksEntrez ID:26148; OMIM: NA; Uniprot ID:CJ012_HUMAN; ENSEMBL ID: ENSG00000155640; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body6 / 7076184
blastocyst3 / 6231948
fetus48 / 56401285
neonate0 / 310970 
infant0 / 236200 
juvenile3 / 5555653
adult79 / 193912140
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus2 / 5640123
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult25 / 193912112
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor1 / 3436629
chondrosarcoma3 / 8282336
colorectal tumor4 / 11424635
esophageal tumor0 / 172900 
gastrointestinal tumor5 / 11936941
germ cell tumor12 / 26384545
glioma6 / 10688356
head and neck tumor5 / 13630236
kidney tumor1 / 6895914
leukemia7 / 9584273
liver tumor2 / 9635920
lung tumor1 / 1031279
lymphoma3 / 7175541
non-neoplasia4 / 9725041
normal155 / 336030746
ovarian tumor1 / 7668213
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS6 / 12568047
prostate cancer3 / 10268029
retinoblastoma2 / 4635643
skin tumor1 / 1249498
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor5 / 9025755
adrenal tumor1 / 1279478
bladder carcinoma0 / 174750 
breast (mammary gland) tumor3 / 9417831
cervical tumor0 / 343660 
chondrosarcoma0 / 828230 
colorectal tumor1 / 1142468
esophageal tumor1 / 1729057
gastrointestinal tumor0 / 1193690 
germ cell tumor6 / 26384522
glioma0 / 1068830 
head and neck tumor1 / 1363027
kidney tumor0 / 689590 
leukemia1 / 9584210
liver tumor1 / 9635910
lung tumor1 / 1031279
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal22 / 33603076
ovarian tumor0 / 766820 
pancreatic tumor1 / 1046169
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor3 / 12519123
uterine tumor2 / 9025722
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue1 / 1310676
adrenal gland3 / 3319790
ascites2 / 4001549
bladder1 / 2975733
blood6 / 12347848
bone1 / 7165513
bone marrow2 / 4880140
brain36 / 110098932
cervix1 / 4817120
connective tissue2 / 14925513
ear6 / 16212370
embryonic tissue11 / 21572250
esophagus0 / 202090 
eye13 / 21105461
heart0 / 896260 
intestine10 / 23447242
kidney5 / 21177723
larynx1 / 2414541
liver11 / 20774352
lung19 / 33697456
lymph0 / 442700 
lymph node13 / 91610141
mammary gland7 / 15327145
mouth3 / 6705244
muscle3 / 10771527
nerve0 / 157680 
ovary1 / 1020519
pancreas8 / 21481237
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta11 / 28082539
prostate5 / 18934526
salivary gland1 / 2015549
skin9 / 21057442
spleen1 / 5395218
stomach6 / 9661962
testis9 / 33044227
thymus4 / 8113149
thyroid1 / 4747321
tonsil0 / 169990 
trachea3 / 5241357
umbilical cord0 / 136800 
uterus5 / 23287821
vascular1 / 5178019
adipose tissue0 / 131060 
adrenal gland1 / 3319730
ascites0 / 400150 
bladder0 / 297570 
blood2 / 12347816
bone0 / 716550 
bone marrow1 / 4880120
brain3 / 11009892
cervix0 / 481710 
connective tissue1 / 1492556
ear0 / 162120 
embryonic tissue1 / 2157224
esophagus1 / 2020949
eye0 / 2110540 
heart0 / 896260 
intestine4 / 23447217
kidney0 / 2117770 
larynx0 / 241450 
liver1 / 2077434
lung1 / 3369742
lymph0 / 442700 
lymph node1 / 9161010
mammary gland3 / 15327119
mouth0 / 670520 
muscle0 / 1077150 
nerve1 / 1576863
ovary0 / 1020510 
pancreas1 / 2148124
parathyroid0 / 205390 
pharynx1 / 4132824
pituitary gland0 / 165850 
placenta6 / 28082521
prostate0 / 1893450 
salivary gland0 / 201550 
skin2 / 2105749
spleen0 / 539520 
stomach0 / 966190 
testis5 / 33044215
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus4 / 23287817
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 219601_s_at
Cell line Expression level Expression bar
721_B_lymphoblasts7.8
Adipocyte6.8
AdrenalCortex9.55
Adrenalgland6.2
Amygdala6.85
Appendix8.3
AtrioventricularNode7.55
BDCA4+_DentriticCells6.6
Bonemarrow7.45
BronchialEpithelialCells6.65
CD105+_Endothelial6.75
CD14+_Monocytes7.45
CD19+_BCells(neg._sel.)7.2
CD33+_Myeloid8.45
CD34+7.85
CD4+_Tcells6.7
CD56+_NKCells7.8
CD71+_EarlyErythroid6.6
CD8+_Tcells5.95
CardiacMyocytes13.4
Caudatenucleus6.15
Cerebellum5.65
CerebellumPeduncles8.6
CiliaryGanglion7.35
CingulateCortex7.5
Colorectaladenocarcinoma6.85
DorsalRootGanglion7.25
FetalThyroid7.15
Fetalbrain6.45
Fetalliver6
Fetallung5.2
GlobusPallidus5.7
Heart12.15
Hypothalamus6.95
Kidney6.1
Leukemia_chronicMyelogenousK-5626.3
Leukemia_promyelocytic-HL-606.05
Leukemialymphoblastic(MOLT-4)5.3
Liver11.1
Lung7.4
Lymphnode5.75
Lymphoma_burkitts(Daudi)9.15
Lymphoma_burkitts(Raji)11.15
MedullaOblongata6.1
OccipitalLobe6.05
OlfactoryBulb5.3
Ovary5.35
Pancreas6
PancreaticIslet7.45
ParietalLobe8.2
Pituitary7.9
Placenta6.55
Pons7
PrefrontalCortex7.85
Prostate7.65
Salivarygland5.75
SkeletalMuscle11.2
Skin7.1
SmoothMuscle7.8
Spinalcord7.2
SubthalamicNucleus6.85
SuperiorCervicalGanglion13.15
TemporalLobe6.7
Testis5.85
TestisGermCell5.45
TestisIntersitial6.15
TestisLeydigCell7.7
TestisSeminiferousTubule5.85
Thalamus7.25
Thymus5.4
Thyroid8.5
Tongue8.65
Tonsil7.05
Trachea5.65
TrigeminalGanglion9.55
Uterus5.6
UterusCorpus7
WholeBlood7.45
Wholebrain5.25
colon6.8
pineal_day8.2
pineal_night8.14
retina8.325
small_intestine6.55
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6283_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala5.7 ± 0.45
Basal Forebrain5.61 ± 0.23
Basal Part of Pons5.04 ± 0.34
Cerebellar Cortex5.4 ± 0.36
Cerebellar Nuclei5.51 ± 0.37
Claustrum5.93 ± 0.4
Epithalamus4.74 ± 0.4
Frontal Lobe5.18 ± 0.36
Globus Pallidus5.67 ± 0.21
Hypothalamus5.1 ± 0.32
Insula5.08 ± 0.25
Limbic Lobe5.32 ± 0.44
Mesencephalon5.38 ± 0.43
Myelencephalon5.34 ± 0.47
Occipital Lobe5.61 ± 0.44
Parietal Lobe5.39 ± 0.44
Pontine Tegmentum5.41 ± 0.46
Striatum5.6 ± 0.4
Subthalamus5.23 ± 0.12
Temporal Lobe5.25 ± 0.37
Thalamus5.37 ± 0.39
White Matter6.11 ± 0.54
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Gm340CBCerebellum18.42
27.05
Gm340CTXCerebral cortex7.15
5.26
Gm340HIPHippocampal region7.34
6.96
Gm340HPFHippocampal formation9.54
8.64
Gm340HYHypothalamus0.39
0.3
Gm340LSXLateral septal complex0.04
0
Gm340MBMidbrain0.65
0.81
Gm340MYMedulla6.6
8.09
Gm340OLFOlfactory bulb18.92
15.19
Gm340PPons2.16
2.93
Gm340PALPallidum1.16
1.06
Gm340RHPRetrohippocampal region13.03
10.78
Gm340sAMYStriatum-like amygdalar nuclei6.67
5.02
Gm340STRStriatum4.25
3.27
Gm340STRdStriatum dorsal region4.73
3.77
Gm340STRvStriatum ventral region2.96
1.93
Gm340THThalamus1.58
1.58
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00510112 25 763 787 ENGASESGDPLDEDDVDTVVDEQPK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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