Annotation Detail for GTPBP5
Basic Information Top
| Gene Symbol: | GTPBP5 ( FLJ10741,MGC29512,ObgH1,dJ1005F21.2 ) |
|---|---|
| Gene Full Name: | GTP binding protein 5 (putative) |
| Band: | 20q13.33 |
| Quick Links | Entrez ID:26164; OMIM: 610919; Uniprot ID:GTPB5_HUMAN; ENSEMBL ID: ENSG00000101181; HGNC ID: |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.340636
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 4 / 70761 | 56 |  |
| blastocyst | 4 / 62319 | 64 | |
| fetus | 30 / 564012 | 53 | |
| neonate | 3 / 31097 | 96 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 1 / 55556 | 17 |  |
| adult | 98 / 1939121 | 50 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 11 / 94178 | 116 | |
| cervical tumor | 4 / 34366 | 116 | |
| chondrosarcoma | 8 / 82823 | 96 | |
| colorectal tumor | 6 / 114246 | 52 | |
| esophageal tumor | 3 / 17290 | 173 | |
| gastrointestinal tumor | 5 / 119369 | 41 | |
| germ cell tumor | 35 / 263845 | 132 | |
| glioma | 2 / 106883 | 18 | |
| head and neck tumor | 13 / 136302 | 95 | |
| kidney tumor | 3 / 68959 | 43 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 12 / 96359 | 124 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 3 / 71755 | 41 | |
| non-neoplasia | 6 / 97250 | 61 | |
| normal | 172 / 3360307 | 51 | |
| ovarian tumor | 3 / 76682 | 39 | |
| pancreatic tumor | 3 / 104616 | 28 | |
| primitive neuroectodermal tumor of the CNS | 1 / 125680 | 7 |  |
| prostate cancer | 3 / 102680 | 29 | |
| retinoblastoma | 1 / 46356 | 21 | |
| skin tumor | 14 / 124949 | 112 | |
| soft tissue/muscle tissue tumor | 9 / 125191 | 71 | |
| uterine tumor | 3 / 90257 | 33 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 2 / 40015 | 49 | |
| bladder | 1 / 29757 | 33 | |
| blood | 2 / 123478 | 16 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 67 / 1100989 | 60 | |
| cervix | 4 / 48171 | 83 | |
| connective tissue | 4 / 149255 | 26 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 3 / 20209 | 148 | |
| eye | 6 / 211054 | 28 | |
| heart | 1 / 89626 | 11 | |
| intestine | 17 / 234472 | 72 | |
| kidney | 7 / 211777 | 33 | |
| larynx | 0 / 24145 | 0 | |
| liver | 17 / 207743 | 81 | |
| lung | 21 / 336974 | 62 | |
| lymph | 3 / 44270 | 67 | |
| lymph node | 4 / 91610 | 43 | |
| mammary gland | 12 / 153271 | 78 | |
| mouth | 16 / 67052 | 238 |  |
| muscle | 13 / 107715 | 120 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 8 / 102051 | 78 | |
| pancreas | 7 / 214812 | 32 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 11 / 280825 | 39 | |
| prostate | 12 / 189345 | 63 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 45 / 210574 | 213 | |
| spleen | 2 / 53952 | 37 | |
| stomach | 1 / 96619 | 10 | |
| testis | 27 / 330442 | 81 | |
| thymus | 10 / 81131 | 123 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 2 / 52413 | 38 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 6 / 232878 | 25 | |
| vascular | 2 / 51780 | 38 | |
Microarray in - Probe name: A_24_P391229
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 5.05 ± 0.67 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 4.88 ± 0.25 | |
| Basal Part of Pons | 4.6 ± 0.44 | |
| Cerebellar Cortex | 4.9 ± 0.42 | |
| Cerebellar Nuclei | 4.73 ± 0.58 | |
| Claustrum | 4.96 ± 0.64 | |
| Epithalamus | 4.69 ± 0.28 | |
| Frontal Lobe | 4.64 ± 0.45 | |
| Globus Pallidus | 5.12 ± 0.36 | |
| Hypothalamus | 4.73 ± 0.36 | |
| Insula | 4.57 ± 0.4 | |
| Limbic Lobe | 4.83 ± 0.49 | |
| Mesencephalon | 4.85 ± 0.46 | |
| Myelencephalon | 4.78 ± 0.48 | |
| Occipital Lobe | 4.94 ± 0.5 | |
| Parietal Lobe | 4.73 ± 0.57 | |
| Pontine Tegmentum | 4.62 ± 0.51 | |
| Striatum | 4.87 ± 0.42 | |
| Subthalamus | 4.34 ± 0.61 | |
| Temporal Lobe | 4.74 ± 0.4 | |
| Thalamus | 4.72 ± 0.45 | |
| White Matter | 5.34 ± 0.44 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Gtpbp5 | CB | Cerebellum | 34.12 | |
| 55.14 | | |||
| Gtpbp5 | CTX | Cerebral cortex | 48.32 | |
| 36.77 | | |||
| Gtpbp5 | HIP | Hippocampal region | 56.61 | |
| 89.42 | | |||
| Gtpbp5 | HPF | Hippocampal formation | 45.89 | |
| 61.31 | | |||
| Gtpbp5 | HY | Hypothalamus | 22.14 | |
| 18.09 | | |||
| Gtpbp5 | LSX | Lateral septal complex | 42.79 | |
| 30.38 | | |||
| Gtpbp5 | MB | Midbrain | 13.81 | |
| 15.49 | | |||
| Gtpbp5 | MY | Medulla | 6.71 | |
| 7.7 | | |||
| Gtpbp5 | OLF | Olfactory bulb | 30.01 | |
| 24.87 | | |||
| Gtpbp5 | P | Pons | 5.9 | |
| 6.71 | | |||
| Gtpbp5 | PAL | Pallidum | 20.46 | |
| 17.03 | | |||
| Gtpbp5 | RHP | Retrohippocampal region | 27.16 | |
| 22.25 | | |||
| Gtpbp5 | sAMY | Striatum-like amygdalar nuclei | 25.66 | |
| 18.79 | | |||
| Gtpbp5 | STR | Striatum | 31.05 | |
| 23.19 | | |||
| Gtpbp5 | STRd | Striatum dorsal region | 27.29 | |
| 20.56 | | |||
| Gtpbp5 | STRv | Striatum ventral region | 43.48 | |
| 30.78 | | |||
| Gtpbp5 | TH | Thalamus | 25.54 | |
| 21.75 | |
| Peptide Name | Peptide Lengh | Peptide Start | Peptide End | Peptide Sequence | Source |
|---|---|---|---|---|---|
| PAp00131957 | 14 | 202 | 215 | APVTCTPGQPGQQR | Peptide Atlas |