AutismKB 2.0

Annotation Detail for C14orf109


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Basic Information Top
Gene Symbol:C14orf109 ( DKFZp564F1123 )
Gene Full Name: chromosome 14 open reading frame 109
Band: 14q32.12
Quick LinksEntrez ID:26175; OMIM: NA; Uniprot ID:CN109_HUMAN; ENSEMBL ID: ENSG00000153485; HGNC ID:
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body0 / 707610 
blastocyst0 / 623190 
fetus18 / 56401231
neonate0 / 310970 
infant0 / 236200 
juvenile0 / 555560 
adult32 / 193912116
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor2 / 9417821
cervical tumor1 / 3436629
chondrosarcoma3 / 8282336
colorectal tumor3 / 11424626
esophageal tumor0 / 172900 
gastrointestinal tumor3 / 11936925
germ cell tumor1 / 2638453
glioma1 / 1068839
head and neck tumor0 / 1363020 
kidney tumor0 / 689590 
leukemia0 / 958420 
liver tumor0 / 963590 
lung tumor0 / 1031270 
lymphoma0 / 717550 
non-neoplasia3 / 9725030
normal71 / 336030721
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS5 / 12568039
prostate cancer1 / 1026809
retinoblastoma0 / 463560 
skin tumor3 / 12494924
soft tissue/muscle tissue tumor1 / 1251917
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites2 / 4001549
bladder1 / 2975733
blood1 / 1234788
bone2 / 7165527
bone marrow0 / 488010 
brain9 / 11009898
cervix1 / 4817120
connective tissue2 / 14925513
ear0 / 162120 
embryonic tissue5 / 21572223
esophagus0 / 202090 
eye3 / 21105414
heart0 / 896260 
intestine7 / 23447229
kidney4 / 21177718
larynx0 / 241450 
liver0 / 2077430 
lung7 / 33697420
lymph0 / 442700 
lymph node2 / 9161021
mammary gland2 / 15327113
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas6 / 21481227
parathyroid1 / 2053948
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta3 / 28082510
prostate4 / 18934521
salivary gland0 / 201550 
skin13 / 21057461
spleen1 / 5395218
stomach1 / 9661910
testis0 / 3304420 
thymus0 / 811310 
thyroid0 / 474730 
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus4 / 23287817
vascular2 / 5178038
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 213246_at
Cell line Expression level Expression bar
721_B_lymphoblasts37.3
Adipocyte6.15
AdrenalCortex7.2
Adrenalgland5.55
Amygdala7.05
Appendix6.9
AtrioventricularNode5.75
BDCA4+_DentriticCells14.35
Bonemarrow6.35
BronchialEpithelialCells12.4
CD105+_Endothelial7.65
CD14+_Monocytes25.9
CD19+_BCells(neg._sel.)28.25
CD33+_Myeloid30
CD34+38.6
CD4+_Tcells7.05
CD56+_NKCells17.9
CD71+_EarlyErythroid5.95
CD8+_Tcells6.15
CardiacMyocytes9.6
Caudatenucleus5.75
Cerebellum5.05
CerebellumPeduncles7.2
CiliaryGanglion4.9
CingulateCortex6.6
Colorectaladenocarcinoma7.65
DorsalRootGanglion5.05
FetalThyroid6.5
Fetalbrain6.1
Fetalliver5.45
Fetallung4.95
GlobusPallidus4.8
Heart9.3
Hypothalamus6.75
Kidney7.3
Leukemia_chronicMyelogenousK-5628.95
Leukemia_promyelocytic-HL-605.95
Leukemialymphoblastic(MOLT-4)5.05
Liver9.05
Lung6.9
Lymphnode7.15
Lymphoma_burkitts(Daudi)8.55
Lymphoma_burkitts(Raji)9.1
MedullaOblongata5.55
OccipitalLobe5.55
OlfactoryBulb4.95
Ovary4.45
Pancreas5.2
PancreaticIslet17.15
ParietalLobe6.8
Pituitary7.7
Placenta7.05
Pons6.1
PrefrontalCortex7.8
Prostate20.15
Salivarygland6.35
SkeletalMuscle8.35
Skin5.45
SmoothMuscle7.05
Spinalcord6.7
SubthalamicNucleus5.85
SuperiorCervicalGanglion8.25
TemporalLobe5.8
Testis5.45
TestisGermCell5.05
TestisIntersitial5.4
TestisLeydigCell6.35
TestisSeminiferousTubule5.4
Thalamus6.45
Thymus6.5
Thyroid26.75
Tongue6.3
Tonsil6.2
Trachea5.9
TrigeminalGanglion7.1
Uterus5.1
UterusCorpus5.95
WholeBlood19.7
Wholebrain5
colon7.85
pineal_day18.26
pineal_night27.24
retina15.275
small_intestine16.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_6294_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala7.03 ± 0.62
Basal Forebrain6.82 ± 0.24
Basal Part of Pons6.8 ± 0.26
Cerebellar Cortex6.61 ± 0.39
Cerebellar Nuclei6.89 ± 0.39
Claustrum7.33 ± 0.57
Epithalamus6.4 ± 0.34
Frontal Lobe6.69 ± 0.43
Globus Pallidus7.34 ± 0.54
Hypothalamus6.63 ± 0.42
Insula6.52 ± 0.32
Limbic Lobe6.87 ± 0.52
Mesencephalon6.71 ± 0.45
Myelencephalon6.82 ± 0.57
Occipital Lobe6.88 ± 0.52
Parietal Lobe6.72 ± 0.51
Pontine Tegmentum6.73 ± 0.48
Striatum6.89 ± 0.67
Subthalamus6.78 ± 0.15
Temporal Lobe6.67 ± 0.54
Thalamus6.75 ± 0.49
White Matter7.2 ± 0.28
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
D230037D09RikCBCerebellum0.6
0.9
D230037D09RikCTXCerebral cortex1.21
0.9
D230037D09RikHIPHippocampal region1.35
1.33
D230037D09RikHPFHippocampal formation1.3
1.25
D230037D09RikHYHypothalamus0.11
0.55
D230037D09RikLSXLateral septal complex0
0
D230037D09RikMBMidbrain0.23
0.42
D230037D09RikMYMedulla0.26
0.34
D230037D09RikOLFOlfactory bulb0.89
0.78
D230037D09RikPPons0.22
0.39
D230037D09RikPALPallidum0.06
0.04
D230037D09RikRHPRetrohippocampal region1.27
1.17
D230037D09RiksAMYStriatum-like amygdalar nuclei0.05
0.04
D230037D09RikSTRStriatum0.16
0.14
D230037D09RikSTRdStriatum dorsal region0.14
0.13
D230037D09RikSTRvStriatum ventral region0.37
0.26
D230037D09RikTHThalamus0.27
0.3
Peptide Top
Peptide Name Peptide Lengh Peptide Start Peptide End Peptide Sequence Source
PAp00041374 24 37 60 LALEHIQQHPEEPLEGTTWTHSLK Peptide Atlas

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


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