AutismKB 2.0

Annotation Detail for OR1A2


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:OR1A2 ( MGC119930,MGC119931,OR17-6 )
Gene Full Name: olfactory receptor, family 1, subfamily A, member 2
Band: 17p13.3
Quick LinksEntrez ID:26189; OMIM: NA; Uniprot ID:OR1A2_HUMAN; ENSEMBL ID: ENSG00000172150; HGNC ID: 8180
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 221445_at
Cell line Expression level Expression bar
721_B_lymphoblasts6.25
Adipocyte5.35
AdrenalCortex6.1
Adrenalgland5.15
Amygdala5.5
Appendix6.65
AtrioventricularNode4.7
BDCA4+_DentriticCells5.5
Bonemarrow7.5
BronchialEpithelialCells5.4
CD105+_Endothelial5.3
CD14+_Monocytes5.65
CD19+_BCells(neg._sel.)5.7
CD33+_Myeloid6.6
CD34+6.5
CD4+_Tcells5.5
CD56+_NKCells6.05
CD71+_EarlyErythroid5.1
CD8+_Tcells5.05
CardiacMyocytes7.7
Caudatenucleus5
Cerebellum6.1
CerebellumPeduncles7.3
CiliaryGanglion5.15
CingulateCortex5.8
Colorectaladenocarcinoma5.5
DorsalRootGanglion4.55
FetalThyroid5.35
Fetalbrain5.4
Fetalliver5.05
Fetallung4.3
GlobusPallidus4.95
Heart7.8
Hypothalamus6.4
Kidney5.25
Leukemia_chronicMyelogenousK-5624.9
Leukemia_promyelocytic-HL-604.9
Leukemialymphoblastic(MOLT-4)4.35
Liver10.8
Lung5.95
Lymphnode4.6
Lymphoma_burkitts(Daudi)7.45
Lymphoma_burkitts(Raji)9.05
MedullaOblongata9.15
OccipitalLobe4.9
OlfactoryBulb4.3
Ovary4.4
Pancreas4.55
PancreaticIslet6.05
ParietalLobe6.35
Pituitary6.4
Placenta5.5
Pons6.55
PrefrontalCortex6.65
Prostate6.3
Salivarygland4.5
SkeletalMuscle9.1
Skin5.45
SmoothMuscle6.25
Spinalcord5.8
SubthalamicNucleus5.4
SuperiorCervicalGanglion10.5
TemporalLobe5.1
Testis4.7
TestisGermCell4.45
TestisIntersitial4.65
TestisLeydigCell5.85
TestisSeminiferousTubule4.7
Thalamus5.65
Thymus4.25
Thyroid6.5
Tongue5.65
Tonsil5.45
Trachea4.6
TrigeminalGanglion6.5
Uterus4.35
UterusCorpus7.55
WholeBlood5.95
Wholebrain4.4
colon5.5
pineal_day6.64
pineal_night6.52
retina6.675
small_intestine5.2
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: CUST_1546_PI416261804
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala2.13 ± 0.98
Basal Forebrain1.62 ± 0.3
Basal Part of Pons1.62 ± 0.49
Cerebellar Cortex1.73 ± 0.79
Cerebellar Nuclei1.98 ± 0.65
Claustrum2.53 ± 0.78
Epithalamus1.28 ± 0.76
Frontal Lobe1.62 ± 0.76
Globus Pallidus1.9 ± 0.38
Hypothalamus1.73 ± 0.72
Insula1.55 ± 0.66
Limbic Lobe1.72 ± 0.63
Mesencephalon1.81 ± 0.73
Myelencephalon1.74 ± 0.68
Occipital Lobe1.67 ± 0.82
Parietal Lobe1.75 ± 0.69
Pontine Tegmentum1.7 ± 0.72
Striatum1.74 ± 0.62
Subthalamus1.79 ± 0.66
Temporal Lobe1.69 ± 0.72
Thalamus1.64 ± 0.65
White Matter2.06 ± 0.49
Mouse Brain ISH
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018