AutismKB 2.0

Annotation Detail for GAS2


View Evidences View Variants View Annotations
Basic Information Top
Gene Symbol:GAS2 ( MGC32610 )
Gene Full Name: growth arrest-specific 2
Band: 11p14.3
Quick LinksEntrez ID:2620; OMIM: 602835; Uniprot ID:GAS2_HUMAN; ENSEMBL ID: ENSG00000148935; HGNC ID: 4167
Relate to Another Database: SFARIGene; denovo-db
Unigene EST Top
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
embryoid body1 / 7076114
blastocyst0 / 623190 
fetus10 / 56401217
neonate0 / 310970 
infant0 / 236200 
juvenile1 / 5555617
adult8 / 19391214
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adrenal tumor0 / 127940 
bladder carcinoma0 / 174750 
breast (mammary gland) tumor1 / 9417810
cervical tumor1 / 3436629
chondrosarcoma0 / 828230 
colorectal tumor0 / 1142460 
esophageal tumor0 / 172900 
gastrointestinal tumor1 / 1193698
germ cell tumor0 / 2638450 
glioma1 / 1068839
head and neck tumor1 / 1363027
kidney tumor1 / 6895914
leukemia0 / 958420 
liver tumor5 / 9635951
lung tumor2 / 10312719
lymphoma0 / 717550 
non-neoplasia0 / 972500 
normal30 / 33603078
ovarian tumor0 / 766820 
pancreatic tumor0 / 1046160 
primitive neuroectodermal tumor of the CNS0 / 1256800 
prostate cancer0 / 1026800 
retinoblastoma0 / 463560 
skin tumor0 / 1249490 
soft tissue/muscle tissue tumor0 / 1251910 
uterine tumor1 / 9025711
Pool Name Gene EST/Total EST in pool Transcripts per million(TPM) Bar based on TPM
adipose tissue0 / 131060 
adrenal gland0 / 331970 
ascites1 / 4001524
bladder0 / 297570 
blood1 / 1234788
bone0 / 716550 
bone marrow0 / 488010 
brain9 / 11009898
cervix1 / 4817120
connective tissue0 / 1492550 
ear0 / 162120 
embryonic tissue5 / 21572223
esophagus0 / 202090 
eye3 / 21105414
heart2 / 8962622
intestine0 / 2344720 
kidney4 / 21177718
larynx0 / 241450 
liver7 / 20774333
lung3 / 3369748
lymph0 / 442700 
lymph node0 / 916100 
mammary gland1 / 1532716
mouth0 / 670520 
muscle1 / 1077159
nerve0 / 157680 
ovary0 / 1020510 
pancreas2 / 2148129
parathyroid0 / 205390 
pharynx0 / 413280 
pituitary gland0 / 165850 
placenta0 / 2808250 
prostate0 / 1893450 
salivary gland1 / 2015549
skin0 / 2105740 
spleen0 / 539520 
stomach0 / 966190 
testis1 / 3304423
thymus1 / 8113112
thyroid1 / 4747321
tonsil0 / 169990 
trachea0 / 524130 
umbilical cord0 / 136800 
uterus1 / 2328784
vascular0 / 517800 
Microarray in BioGPS Top
Select probe  
  • Microarray Platform: GeneAtlas U133A, gcrma
  • Affymatrix Probe ID: 205848_at
Cell line Expression level Expression bar
721_B_lymphoblasts104.25
Adipocyte7.1
AdrenalCortex9.05
Adrenalgland6.75
Amygdala7.5
Appendix11.15
AtrioventricularNode6.6
BDCA4+_DentriticCells6.95
Bonemarrow8.3
BronchialEpithelialCells6.95
CD105+_Endothelial7.3
CD14+_Monocytes7.8
CD19+_BCells(neg._sel.)7.45
CD33+_Myeloid8.8
CD34+8.55
CD4+_Tcells7.25
CD56+_NKCells7.95
CD71+_EarlyErythroid7.1
CD8+_Tcells6.35
CardiacMyocytes11.65
Caudatenucleus6.65
Cerebellum6.15
CerebellumPeduncles9.1
CiliaryGanglion6.5
CingulateCortex7.8
Colorectaladenocarcinoma7.35
DorsalRootGanglion6.45
FetalThyroid7.4
Fetalbrain7
Fetalliver82.5
Fetallung5.75
GlobusPallidus6.15
Heart11.95
Hypothalamus7.85
Kidney6.95
Leukemia_chronicMyelogenousK-5626.6
Leukemia_promyelocytic-HL-606.5
Leukemialymphoblastic(MOLT-4)5.55
Liver11.75
Lung8
Lymphnode6.05
Lymphoma_burkitts(Daudi)9.9
Lymphoma_burkitts(Raji)11.3
MedullaOblongata6.6
OccipitalLobe6.55
OlfactoryBulb6.9
Ovary5.35
Pancreas6.25
PancreaticIslet9.7
ParietalLobe8.55
Pituitary8.65
Placenta7.15
Pons7.45
PrefrontalCortex8.85
Prostate8.25
Salivarygland6.25
SkeletalMuscle10.9
Skin6.85
SmoothMuscle8.25
Spinalcord8.9
SubthalamicNucleus7.2
SuperiorCervicalGanglion11.4
TemporalLobe7
Testis6.3
TestisGermCell5.75
TestisIntersitial6.25
TestisLeydigCell7.75
TestisSeminiferousTubule6.25
Thalamus7.75
Thymus5.6
Thyroid8.8
Tongue8.35
Tonsil7.3
Trachea6.1
TrigeminalGanglion9.7
Uterus5.75
UterusCorpus7.75
WholeBlood7.95
Wholebrain5.8
colon7.4
pineal_day10.5
pineal_night9.5
retina8.85
small_intestine6.9
Allen Brain Atlas Top
Human Whole Brain Microarrayview in Allen Brain Atlas
  • Probe id     Donor id      
  • Probe name: A_32_P24140
  • Donor H0351.2001
  • Sex: Male     Age: 24 years     Race/Ethnicity: African American     Handedness: Left
  • Tissue Receipt Date: 7/29/2009     Serology: Pass      Tissue pH :6.72     Additional Medical Information :History of asthma
  • Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
  • Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
Tissue Expression(mean ± stddev) Expression Bar
Amygdala3.95 ± 0.74
Basal Forebrain3.86 ± 0.49
Basal Part of Pons4.49 ± 0.57
Cerebellar Cortex3.7 ± 0.64
Cerebellar Nuclei5.71 ± 0.57
Claustrum3.55 ± 1.01
Epithalamus4.21 ± 0.69
Frontal Lobe4.55 ± 0.58
Globus Pallidus5.68 ± 0.5
Hypothalamus4.21 ± 0.6
Insula4.41 ± 0.34
Limbic Lobe3.86 ± 0.62
Mesencephalon4.46 ± 0.87
Myelencephalon4.31 ± 0.75
Occipital Lobe4.32 ± 0.62
Parietal Lobe4.66 ± 0.9
Pontine Tegmentum4.68 ± 0.75
Striatum4.14 ± 0.67
Subthalamus5.07 ± 0.69
Temporal Lobe4.42 ± 0.57
Thalamus4.79 ± 0.66
White Matter6 ± 0.58
Mouse Brain ISH
Gene Symbol Brain Structure ID Brain Structure Name Express Desity/Level (Meatured by ISH) Express Bar
Gas2CBCerebellum12.42
14.54
Gas2CTXCerebral cortex8.92
6.5
Gas2HIPHippocampal region12.57
13.52
Gas2HPFHippocampal formation19.66
18.24
Gas2HYHypothalamus8.3
5.96
Gas2LSXLateral septal complex0.65
0.55
Gas2MBMidbrain13.69
12.1
Gas2MYMedulla31.85
32.41
Gas2OLFOlfactory bulb11.9
9.03
Gas2PPons17.67
17.14
Gas2PALPallidum5.62
4.71
Gas2RHPRetrohippocampal region31.94
25.25
Gas2sAMYStriatum-like amygdalar nuclei3.72
2.61
Gas2STRStriatum5.09
3.66
Gas2STRdStriatum dorsal region6.39
4.72
Gas2STRvStriatum ventral region3.79
2.28
Gas2THThalamus16.85
12.68
Peptide Top

Simple Query:


  (e.g. CHD8)

Syndromic Genes

Non-syndromic Genes

AutismKB Statistics

  • Studies: 1,036
  • Genes: 1,379
  • CNVs/SVs: 5,420
  • SNVs/Indels: 11,669
  • de novo Mutations: 5,669
  • Mosaics: 789
  • Linkage Regions: 172
  • Paper Collected: 6/30/2018
  • Last Update: 8/26/2018


Copyright © 2017, Center for Bioinformatics , Peking University | All Rights Reserved