Annotation Detail for PITPNC1
Basic Information Top
| Gene Symbol: | PITPNC1 ( RDGB-BETA,RDGBB,RDGBB1 ) |
|---|---|
| Gene Full Name: | phosphatidylinositol transfer protein, cytoplasmic 1 |
| Band: | 17q24.3 |
| Quick Links | Entrez ID:26207; OMIM: 605134; Uniprot ID:PITC1_HUMAN; ENSEMBL ID: ENSG00000154217; HGNC ID: 21045 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.696160
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 1 / 62319 | 16 |  |
| fetus | 18 / 564012 | 31 | |
| neonate | 0 / 31097 | 0 | |
| infant | 0 / 23620 | 0 | |
| juvenile | 0 / 55556 | 0 | |
| adult | 75 / 1939121 | 38 | |
| embryoid body | 0 / 70761 | 0 | |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 4 / 564012 | 7 |  |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 |  |
| juvenile | 0 / 55556 | 0 | |
| adult | 26 / 1939121 | 13 | |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 2 / 94178 | 21 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 3 / 114246 | 26 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 6 / 119369 | 50 | |
| germ cell tumor | 9 / 263845 | 34 | |
| glioma | 5 / 106883 | 46 | |
| head and neck tumor | 3 / 136302 | 22 | |
| kidney tumor | 2 / 68959 | 29 | |
| leukemia | 9 / 95842 | 93 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 2 / 103127 | 19 | |
| lymphoma | 4 / 71755 | 55 | |
| non-neoplasia | 3 / 97250 | 30 | |
| normal | 111 / 3360307 | 33 | |
| ovarian tumor | 4 / 76682 | 52 | |
| pancreatic tumor | 4 / 104616 | 38 | |
| primitive neuroectodermal tumor of the CNS | 2 / 125680 | 15 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 17 / 124949 | 136 | |
| soft tissue/muscle tissue tumor | 5 / 125191 | 39 | |
| uterine tumor | 1 / 90257 | 11 | |
| adrenal tumor | 0 / 12794 | 0 | |
| bladder carcinoma | 0 / 17475 | 0 | |
| breast (mammary gland) tumor | 0 / 94178 | 0 | |
| cervical tumor | 0 / 34366 | 0 | |
| chondrosarcoma | 2 / 82823 | 24 | |
| colorectal tumor | 0 / 114246 | 0 | |
| esophageal tumor | 0 / 17290 | 0 | |
| gastrointestinal tumor | 0 / 119369 | 0 | |
| germ cell tumor | 5 / 263845 | 18 | |
| glioma | 0 / 106883 | 0 | |
| head and neck tumor | 0 / 136302 | 0 | |
| kidney tumor | 0 / 68959 | 0 | |
| leukemia | 0 / 95842 | 0 | |
| liver tumor | 0 / 96359 | 0 | |
| lung tumor | 0 / 103127 | 0 | |
| lymphoma | 0 / 71755 | 0 | |
| non-neoplasia | 1 / 97250 | 10 | |
| normal | 51 / 3360307 | 15 | |
| ovarian tumor | 0 / 76682 | 0 | |
| pancreatic tumor | 0 / 104616 | 0 | |
| primitive neuroectodermal tumor of the CNS | 0 / 125680 | 0 | |
| prostate cancer | 0 / 102680 | 0 | |
| retinoblastoma | 0 / 46356 | 0 | |
| skin tumor | 0 / 124949 | 0 | |
| soft tissue/muscle tissue tumor | 1 / 125191 | 7 | |
| uterine tumor | 0 / 90257 | 0 |
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
| |||
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 0 / 33197 | 0 | |
| ascites | 3 / 40015 | 74 | |
| bladder | 0 / 29757 | 0 | |
| blood | 1 / 123478 | 8 | |
| bone | 2 / 71655 | 27 | |
| bone marrow | 3 / 48801 | 61 | |
| brain | 28 / 1100989 | 25 | |
| cervix | 1 / 48171 | 20 | |
| connective tissue | 6 / 149255 | 40 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 8 / 215722 | 37 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 29 / 211054 | 137 | |
| heart | 4 / 89626 | 44 | |
| intestine | 6 / 234472 | 25 | |
| kidney | 5 / 211777 | 23 | |
| larynx | 2 / 24145 | 82 | |
| liver | 2 / 207743 | 9 | |
| lung | 4 / 336974 | 11 | |
| lymph | 1 / 44270 | 22 | |
| lymph node | 6 / 91610 | 65 | |
| mammary gland | 4 / 153271 | 26 | |
| mouth | 3 / 67052 | 44 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 0 / 15768 | 0 | |
| ovary | 4 / 102051 | 39 | |
| pancreas | 11 / 214812 | 51 | |
| parathyroid | 1 / 20539 | 48 | |
| pharynx | 1 / 41328 | 24 | |
| pituitary gland | 1 / 16585 | 60 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 2 / 189345 | 10 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 17 / 210574 | 80 | |
| spleen | 1 / 53952 | 18 | |
| stomach | 2 / 96619 | 20 | |
| testis | 6 / 330442 | 18 | |
| thymus | 1 / 81131 | 12 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 2 / 16999 | 117 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 5 / 232878 | 21 | |
| vascular | 1 / 51780 | 19 | |
| adipose tissue | 0 / 13106 | 0 | |
| adrenal gland | 1 / 33197 | 30 | |
| ascites | 0 / 40015 | 0 | |
| bladder | 0 / 29757 | 0 | |
| blood | 0 / 123478 | 0 | |
| bone | 1 / 71655 | 13 | |
| bone marrow | 0 / 48801 | 0 | |
| brain | 14 / 1100989 | 12 | |
| cervix | 0 / 48171 | 0 | |
| connective tissue | 1 / 149255 | 6 | |
| ear | 0 / 16212 | 0 | |
| embryonic tissue | 1 / 215722 | 4 | |
| esophagus | 0 / 20209 | 0 | |
| eye | 5 / 211054 | 23 | |
| heart | 1 / 89626 | 11 | |
| intestine | 0 / 234472 | 0 | |
| kidney | 0 / 211777 | 0 | |
| larynx | 0 / 24145 | 0 | |
| liver | 1 / 207743 | 4 | |
| lung | 2 / 336974 | 5 | |
| lymph | 0 / 44270 | 0 | |
| lymph node | 8 / 91610 | 87 | |
| mammary gland | 0 / 153271 | 0 | |
| mouth | 0 / 67052 | 0 | |
| muscle | 0 / 107715 | 0 | |
| nerve | 1 / 15768 | 63 | |
| ovary | 0 / 102051 | 0 | |
| pancreas | 9 / 214812 | 41 | |
| parathyroid | 0 / 20539 | 0 | |
| pharynx | 0 / 41328 | 0 | |
| pituitary gland | 0 / 16585 | 0 | |
| placenta | 1 / 280825 | 3 | |
| prostate | 1 / 189345 | 5 | |
| salivary gland | 0 / 20155 | 0 | |
| skin | 0 / 210574 | 0 | |
| spleen | 0 / 53952 | 0 | |
| stomach | 0 / 96619 | 0 | |
| testis | 0 / 330442 | 0 | |
| thymus | 0 / 81131 | 0 | |
| thyroid | 0 / 47473 | 0 | |
| tonsil | 0 / 16999 | 0 | |
| trachea | 0 / 52413 | 0 | |
| umbilical cord | 0 / 13680 | 0 | |
| uterus | 0 / 232878 | 0 | |
| vascular | 0 / 51780 | 0 |
- Microarray Platform: GeneAtlas U133A, gcrma
- Affymatrix Probe ID: 219155_at
| Cell line | Expression level | Expression bar |
|---|---|---|
| ||
| 721_B_lymphoblasts | 21.6 | |
| Adipocyte | 21.1 | |
| AdrenalCortex | 26.85 | |
| Adrenalgland | 20.45 | |
| Amygdala | 28.7 | |
| Appendix | 26.1 | |
| AtrioventricularNode | 21 | |
| BDCA4+_DentriticCells | 21.65 | |
| Bonemarrow | 30 | |
| BronchialEpithelialCells | 26.55 | |
| CD105+_Endothelial | 12.7 | |
| CD14+_Monocytes | 58.95 | |
| CD19+_BCells(neg._sel.) | 31.25 | |
| CD33+_Myeloid | 60.15 | |
| CD34+ | 23.05 | |
| CD4+_Tcells | 217.95 |  |
| CD56+_NKCells | 617.55 | |
| CD71+_EarlyErythroid | 20.6 | |
| CD8+_Tcells | 306.05 | |
| CardiacMyocytes | 29.15 | |
| Caudatenucleus | 28.4 | |
| Cerebellum | 21.7 | |
| CerebellumPeduncles | 38.25 | |
| CiliaryGanglion | 16.8 | |
| CingulateCortex | 31.55 | |
| Colorectaladenocarcinoma | 25.6 | |
| DorsalRootGanglion | 17.95 | |
| FetalThyroid | 27.5 | |
| Fetalbrain | 26.95 | |
| Fetalliver | 20.35 | |
| Fetallung | 23.6 | |
| GlobusPallidus | 19.1 | |
| Heart | 32.7 | |
| Hypothalamus | 29.15 | |
| Kidney | 30.5 | |
| Leukemia_chronicMyelogenousK-562 | 22.1 | |
| Leukemia_promyelocytic-HL-60 | 25.15 | |
| Leukemialymphoblastic(MOLT-4) | 66.55 | |
| Liver | 31.9 | |
| Lung | 67.1 | |
| Lymphnode | 26.65 | |
| Lymphoma_burkitts(Daudi) | 37.1 | |
| Lymphoma_burkitts(Raji) | 44.6 | |
| MedullaOblongata | 24.15 | |
| OccipitalLobe | 24.1 | |
| OlfactoryBulb | 20.95 | |
| Ovary | 17.3 | |
| Pancreas | 23.75 | |
| PancreaticIslet | 85.2 | |
| ParietalLobe | 28.3 | |
| Pituitary | 49.5 | |
| Placenta | 27.5 | |
| Pons | 26.2 | |
| PrefrontalCortex | 44.15 | |
| Prostate | 32.2 | |
| Salivarygland | 23.9 | |
| SkeletalMuscle | 46.6 | |
| Skin | 19.95 | |
| SmoothMuscle | 23.75 | |
| Spinalcord | 43 | |
| SubthalamicNucleus | 21.4 | |
| SuperiorCervicalGanglion | 34.55 | |
| TemporalLobe | 28.3 | |
| Testis | 21.6 | |
| TestisGermCell | 15.9 | |
| TestisIntersitial | 13.7 | |
| TestisLeydigCell | 28.5 | |
| TestisSeminiferousTubule | 21.85 | |
| Thalamus | 28.9 | |
| Thymus | 75.5 | |
| Thyroid | 26.55 | |
| Tongue | 16.5 | |
| Tonsil | 32.55 | |
| Trachea | 24.45 | |
| TrigeminalGanglion | 47.1 | |
| Uterus | 18 | |
| UterusCorpus | 25.85 | |
| WholeBlood | 127.2 | |
| Wholebrain | 26.75 | |
| colon | 18.4 | |
| pineal_day | 30.06 | |
| pineal_night | 32.78 | |
| retina | 38.825 | |
| small_intestine | 17.7 | |
- Probe name: A_23_P66473
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 8.44 ± 0.42 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 8.88 ± 0.25 | |
| Basal Part of Pons | 7.84 ± 0.41 | |
| Cerebellar Cortex | 8.01 ± 0.17 | |
| Cerebellar Nuclei | 8.6 ± 0.43 | |
| Claustrum | 8.42 ± 0.43 | |
| Epithalamus | 8.92 ± 0.22 | |
| Frontal Lobe | 8.48 ± 0.45 | |
| Globus Pallidus | 9.81 ± 0.39 | |
| Hypothalamus | 8.73 ± 0.27 | |
| Insula | 8.38 ± 0.3 | |
| Limbic Lobe | 8.19 ± 0.55 | |
| Mesencephalon | 8.72 ± 0.57 | |
| Myelencephalon | 8.65 ± 0.54 | |
| Occipital Lobe | 8.89 ± 0.7 | |
| Parietal Lobe | 8.62 ± 0.43 | |
| Pontine Tegmentum | 8.68 ± 0.36 | |
| Striatum | 9.27 ± 0.54 | |
| Subthalamus | 8.64 ± 0.19 | |
| Temporal Lobe | 8.2 ± 0.4 | |
| Thalamus | 9.15 ± 0.46 | |
| White Matter | 7.5 ± 0.35 | |
Mouse Brain ISH 