Annotation Detail for TSPAN17
Basic Information Top
| Gene Symbol: | TSPAN17 ( FBX23,FBXO23,MGC14859,MGC71255,TM4SF17 ) |
|---|---|
| Gene Full Name: | tetraspanin 17 |
| Band: | 5q35.2 |
| Quick Links | Entrez ID:26262; OMIM: NA; Uniprot ID:TSN17_HUMAN; ENSEMBL ID: ENSG00000048140; HGNC ID: 13594 |
| Relate to Another Database: | SFARIGene; denovo-db |
- Unigene ID: Hs.532129
| Pool Name | Gene EST/Total EST in pool | Transcripts per million(TPM) | Bar based on TPM |
|---|---|---|---|
 | |||
| embryoid body | 3 / 70761 | 42 |  |
| blastocyst | 0 / 62319 | 0 | |
| fetus | 10 / 564012 | 17 | |
| neonate | 0 / 31097 | 0 | |
| infant | 2 / 23620 | 84 |  |
| juvenile | 2 / 55556 | 35 | |
| adult | 87 / 1939121 | 44 | |
Microarray in - Probe name: CUST_1344_PI416261804
- Donor H0351.2001
- Sex: Male Age: 24 years Race/Ethnicity: African American Handedness: Left
- Tissue Receipt Date: 7/29/2009 Serology: Pass Tissue pH :6.72 Additional Medical Information :History of asthma
- Postmortem Interval: 23 hours (estimated time of death to time that tissue is frozen)
- Toxicology: Positive for atropine and caffeine, at levels usually not toxicologically significant
| Tissue | Expression(mean ± stddev) | Expression Bar |
|---|---|---|
| Amygdala | 3.69 ± 0.78 | ![](../"images/bar_3.png"){kind=small}   |
| Basal Forebrain | 3.18 ± 0.44 | |
| Basal Part of Pons | 3.44 ± 0.76 | |
| Cerebellar Cortex | 3.77 ± 0.46 | |
| Cerebellar Nuclei | 3.31 ± 0.58 | |
| Claustrum | 3.68 ± 0.58 | |
| Epithalamus | 3.05 ± 0.68 | |
| Frontal Lobe | 3.49 ± 0.59 | |
| Globus Pallidus | 2.31 ± 0.44 | |
| Hypothalamus | 3.12 ± 0.46 | |
| Insula | 3.51 ± 0.33 | |
| Limbic Lobe | 3.4 ± 0.63 | |
| Mesencephalon | 3.42 ± 0.71 | |
| Myelencephalon | 3.32 ± 0.58 | |
| Occipital Lobe | 3.33 ± 0.65 | |
| Parietal Lobe | 3.34 ± 0.55 | |
| Pontine Tegmentum | 3.3 ± 0.57 | |
| Striatum | 2.51 ± 0.76 | |
| Subthalamus | 3.69 ± 0.29 | |
| Temporal Lobe | 3.61 ± 0.5 | |
| Thalamus | 3.25 ± 0.65 | |
| White Matter | 2.4 ± 0.58 | |
Mouse Brain ISH 
| Gene Symbol | Brain Structure ID | Brain Structure Name | Express Desity/Level (Meatured by ISH) | Express Bar |
|---|---|---|---|---|
| Tspan17 | CB | Cerebellum | 7.56 | |
| 7.67 | | |||
| Tspan17 | CTX | Cerebral cortex | 47.88 | |
| 18.49 | | |||
| Tspan17 | HIP | Hippocampal region | 12.36 | |
| 10.58 | | |||
| Tspan17 | HPF | Hippocampal formation | 11.11 | |
| 7.47 | | |||
| Tspan17 | HY | Hypothalamus | 15.01 | |
| 4.96 | | |||
| Tspan17 | LSX | Lateral septal complex | 0.27 | |
| 0.12 | | |||
| Tspan17 | MB | Midbrain | 14.56 | |
| 7.18 | | |||
| Tspan17 | MY | Medulla | 34.81 | |
| 22.46 | | |||
| Tspan17 | OLF | Olfactory bulb | 15.37 | |
| 7.73 | | |||
| Tspan17 | P | Pons | 32.8 | |
| 19.36 | | |||
| Tspan17 | PAL | Pallidum | 14.77 | |
| 6.75 | | |||
| Tspan17 | RHP | Retrohippocampal region | 9.26 | |
| 3.27 | | |||
| Tspan17 | sAMY | Striatum-like amygdalar nuclei | 3.59 | |
| 1.54 | | |||
| Tspan17 | STR | Striatum | 3.63 | |
| 1.71 | | |||
| Tspan17 | STRd | Striatum dorsal region | 4.23 | |
| 2.13 | | |||
| Tspan17 | STRv | Striatum ventral region | 2.91 | |
| 1.06 | | |||
| Tspan17 | TH | Thalamus | 16.77 | |
| 6.27 | |